Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdk5rap1Q8BTW8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Cdk5rap1Q8BTW8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk5rap1Q8BTW8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk5rap1Q8BTW8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Cdk5rap1Q8BTW8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk5rap1Q8BTW8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk5rap1Q8BTW8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk5rap1Q8BTW8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdk5rap1Q8BTW8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdk5rap1Q8BTW8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdk5rap1Q8BTW8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk5rap1Q8BTW8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cdk5rap1Q8BTW8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdk5rap1Q8BTW8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk5rap1Q8BTW8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk5rap1Q8BTW8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdk5rap1Q8BTW8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.8■■□□□ 1.08
Cdk5rap1Q8BTW8 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.8■■□□□ 1.08
Cdk5rap1Q8BTW8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Terc-201ENSMUST00000082862 423 ntBASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk5rap1Q8BTW8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk5rap1Q8BTW8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Gm12366-201ENSMUST00000121722 873 ntBASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Gm5786-201ENSMUST00000085368 882 ntBASIC21.77■■□□□ 1.08
Cdk5rap1Q8BTW8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk5rap1Q8BTW8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk5rap1Q8BTW8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk5rap1Q8BTW8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk5rap1Q8BTW8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdk5rap1Q8BTW8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.74■■□□□ 1.07
Cdk5rap1Q8BTW8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk5rap1Q8BTW8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk5rap1Q8BTW8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.73■■□□□ 1.07
Cdk5rap1Q8BTW8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk5rap1Q8BTW8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk5rap1Q8BTW8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk5rap1Q8BTW8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.72■■□□□ 1.07
Cdk5rap1Q8BTW8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk5rap1Q8BTW8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk5rap1Q8BTW8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk5rap1Q8BTW8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk5rap1Q8BTW8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdk5rap1Q8BTW8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdk5rap1Q8BTW8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk5rap1Q8BTW8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk5rap1Q8BTW8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk5rap1Q8BTW8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk5rap1Q8BTW8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms