Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SynbQ8BI41 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SynbQ8BI41 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.72■■□□□ 1.07
SynbQ8BI41 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SynbQ8BI41 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SynbQ8BI41 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SynbQ8BI41 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SynbQ8BI41 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.7■■□□□ 1.06
SynbQ8BI41 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SynbQ8BI41 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SynbQ8BI41 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SynbQ8BI41 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynbQ8BI41 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynbQ8BI41 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SynbQ8BI41 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SynbQ8BI41 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SynbQ8BI41 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SynbQ8BI41 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.67■■□□□ 1.06
SynbQ8BI41 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.67■■□□□ 1.06
SynbQ8BI41 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SynbQ8BI41 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SynbQ8BI41 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SynbQ8BI41 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SynbQ8BI41 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.66■■□□□ 1.06
SynbQ8BI41 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.65■■□□□ 1.06
SynbQ8BI41 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynbQ8BI41 Gm7332-201ENSMUST00000118351 454 ntBASIC21.65■■□□□ 1.06
SynbQ8BI41 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynbQ8BI41 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SynbQ8BI41 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynbQ8BI41 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SynbQ8BI41 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
SynbQ8BI41 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SynbQ8BI41 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.63■■□□□ 1.05
SynbQ8BI41 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SynbQ8BI41 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.63■■□□□ 1.05
SynbQ8BI41 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SynbQ8BI41 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynbQ8BI41 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SynbQ8BI41 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SynbQ8BI41 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.62■■□□□ 1.05
SynbQ8BI41 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynbQ8BI41 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SynbQ8BI41 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SynbQ8BI41 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SynbQ8BI41 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SynbQ8BI41 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SynbQ8BI41 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SynbQ8BI41 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SynbQ8BI41 Gm27502-201ENSMUST00000183495 199 ntBASIC21.6■■□□□ 1.05
SynbQ8BI41 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SynbQ8BI41 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.6■■□□□ 1.05
SynbQ8BI41 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SynbQ8BI41 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.59■■□□□ 1.05
SynbQ8BI41 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SynbQ8BI41 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SynbQ8BI41 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SynbQ8BI41 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SynbQ8BI41 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.58■■□□□ 1.05
SynbQ8BI41 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SynbQ8BI41 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SynbQ8BI41 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.58■■□□□ 1.05
SynbQ8BI41 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SynbQ8BI41 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SynbQ8BI41 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.57■■□□□ 1.04
SynbQ8BI41 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SynbQ8BI41 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.56■■□□□ 1.04
SynbQ8BI41 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SynbQ8BI41 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SynbQ8BI41 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SynbQ8BI41 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SynbQ8BI41 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.54■■□□□ 1.04
SynbQ8BI41 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SynbQ8BI41 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SynbQ8BI41 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SynbQ8BI41 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SynbQ8BI41 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SynbQ8BI41 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SynbQ8BI41 Gm14523-201ENSMUST00000117260 558 ntBASIC21.53■■□□□ 1.04
SynbQ8BI41 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SynbQ8BI41 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.53■■□□□ 1.04
SynbQ8BI41 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SynbQ8BI41 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SynbQ8BI41 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SynbQ8BI41 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SynbQ8BI41 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SynbQ8BI41 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SynbQ8BI41 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.52■■□□□ 1.04
SynbQ8BI41 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SynbQ8BI41 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SynbQ8BI41 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SynbQ8BI41 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SynbQ8BI41 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SynbQ8BI41 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms