Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps13bQ80TY5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps13bQ80TY5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps13bQ80TY5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps13bQ80TY5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps13bQ80TY5 Gm45102-201ENSMUST00000207427 857 ntBASIC14.32□□□□□ -0.12
Vps13bQ80TY5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vps13bQ80TY5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps13bQ80TY5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps13bQ80TY5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.31□□□□□ -0.12
Vps13bQ80TY5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps13bQ80TY5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps13bQ80TY5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps13bQ80TY5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.3□□□□□ -0.12
Vps13bQ80TY5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps13bQ80TY5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps13bQ80TY5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps13bQ80TY5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps13bQ80TY5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps13bQ80TY5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps13bQ80TY5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13bQ80TY5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.28□□□□□ -0.12
Vps13bQ80TY5 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.28□□□□□ -0.12
Vps13bQ80TY5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13bQ80TY5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps13bQ80TY5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13bQ80TY5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps13bQ80TY5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.27□□□□□ -0.12
Vps13bQ80TY5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vps13bQ80TY5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps13bQ80TY5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps13bQ80TY5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps13bQ80TY5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps13bQ80TY5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps13bQ80TY5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.25□□□□□ -0.13
Vps13bQ80TY5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vps13bQ80TY5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Gm43566-201ENSMUST00000196851 808 ntBASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps13bQ80TY5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps13bQ80TY5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Gm37136-201ENSMUST00000194368 194 ntBASIC14.22□□□□□ -0.13
Vps13bQ80TY5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps13bQ80TY5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vps13bQ80TY5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps13bQ80TY5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps13bQ80TY5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Vps13bQ80TY5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.21□□□□□ -0.14
Vps13bQ80TY5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC14.21□□□□□ -0.14
Vps13bQ80TY5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps13bQ80TY5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps13bQ80TY5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13bQ80TY5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13bQ80TY5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms