Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd3Q6P9Z1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd3Q6P9Z1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd3Q6P9Z1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd3Q6P9Z1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smarcd3Q6P9Z1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd3Q6P9Z1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smarcd3Q6P9Z1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd3Q6P9Z1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd3Q6P9Z1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd3Q6P9Z1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smarcd3Q6P9Z1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smarcd3Q6P9Z1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smarcd3Q6P9Z1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.89■□□□□ 0.93
Smarcd3Q6P9Z1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smarcd3Q6P9Z1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd3Q6P9Z1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smarcd3Q6P9Z1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smarcd3Q6P9Z1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Smarcd3Q6P9Z1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smarcd3Q6P9Z1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smarcd3Q6P9Z1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Smarcd3Q6P9Z1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Smarcd3Q6P9Z1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.85■□□□□ 0.93
Smarcd3Q6P9Z1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.85■□□□□ 0.93
Smarcd3Q6P9Z1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd3Q6P9Z1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd3Q6P9Z1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcd3Q6P9Z1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcd3Q6P9Z1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Smarcd3Q6P9Z1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smarcd3Q6P9Z1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Smarcd3Q6P9Z1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd3Q6P9Z1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Smarcd3Q6P9Z1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd3Q6P9Z1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd3Q6P9Z1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcd3Q6P9Z1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcd3Q6P9Z1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcd3Q6P9Z1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.81■□□□□ 0.92
Smarcd3Q6P9Z1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcd3Q6P9Z1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smarcd3Q6P9Z1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Smarcd3Q6P9Z1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.79■□□□□ 0.92
Smarcd3Q6P9Z1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Smarcd3Q6P9Z1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcd3Q6P9Z1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd3Q6P9Z1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd3Q6P9Z1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcd3Q6P9Z1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcd3Q6P9Z1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Smarcd3Q6P9Z1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd3Q6P9Z1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd3Q6P9Z1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd3Q6P9Z1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcd3Q6P9Z1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd3Q6P9Z1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smarcd3Q6P9Z1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd3Q6P9Z1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcd3Q6P9Z1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Smarcd3Q6P9Z1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd3Q6P9Z1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd3Q6P9Z1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd3Q6P9Z1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarcd3Q6P9Z1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd3Q6P9Z1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd3Q6P9Z1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd3Q6P9Z1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd3Q6P9Z1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarcd3Q6P9Z1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarcd3Q6P9Z1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.71■□□□□ 0.91
Smarcd3Q6P9Z1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd3Q6P9Z1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarcd3Q6P9Z1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarcd3Q6P9Z1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms