Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sptbn1Q62261 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sptbn1Q62261 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sptbn1Q62261 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sptbn1Q62261 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptbn1Q62261 Gm13238-201ENSMUST00000117655 780 ntBASIC19.82■□□□□ 0.76
Sptbn1Q62261 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptbn1Q62261 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sptbn1Q62261 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptbn1Q62261 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.81■□□□□ 0.76
Sptbn1Q62261 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.81■□□□□ 0.76
Sptbn1Q62261 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.81■□□□□ 0.76
Sptbn1Q62261 Gm9959-201ENSMUST00000068277 390 ntBASIC19.81■□□□□ 0.76
Sptbn1Q62261 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sptbn1Q62261 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sptbn1Q62261 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn1Q62261 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptbn1Q62261 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn1Q62261 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.8■□□□□ 0.76
Sptbn1Q62261 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn1Q62261 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn1Q62261 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptbn1Q62261 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sptbn1Q62261 Gm9812-201ENSMUST00000061934 968 ntBASIC19.79■□□□□ 0.76
Sptbn1Q62261 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.79■□□□□ 0.76
Sptbn1Q62261 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sptbn1Q62261 Gm43566-201ENSMUST00000196851 808 ntBASIC19.78■□□□□ 0.76
Sptbn1Q62261 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sptbn1Q62261 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptbn1Q62261 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sptbn1Q62261 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.78■□□□□ 0.76
Sptbn1Q62261 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.77■□□□□ 0.76
Sptbn1Q62261 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptbn1Q62261 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptbn1Q62261 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Sptbn1Q62261 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.77■□□□□ 0.75
Sptbn1Q62261 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sptbn1Q62261 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.77■□□□□ 0.75
Sptbn1Q62261 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.76■□□□□ 0.75
Sptbn1Q62261 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sptbn1Q62261 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.76■□□□□ 0.75
Sptbn1Q62261 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sptbn1Q62261 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn1Q62261 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn1Q62261 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sptbn1Q62261 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sptbn1Q62261 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sptbn1Q62261 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptbn1Q62261 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.72■□□□□ 0.75
Sptbn1Q62261 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.72■□□□□ 0.75
Sptbn1Q62261 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.72■□□□□ 0.75
Sptbn1Q62261 Serp2-204ENSMUST00000228055 705 ntBASIC19.72■□□□□ 0.75
Sptbn1Q62261 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sptbn1Q62261 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sptbn1Q62261 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.7■□□□□ 0.74
Sptbn1Q62261 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sptbn1Q62261 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptbn1Q62261 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sptbn1Q62261 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
Sptbn1Q62261 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sptbn1Q62261 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sptbn1Q62261 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptbn1Q62261 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sptbn1Q62261 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.67■□□□□ 0.74
Sptbn1Q62261 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sptbn1Q62261 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.65■□□□□ 0.74
Sptbn1Q62261 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.65■□□□□ 0.74
Sptbn1Q62261 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sptbn1Q62261 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sptbn1Q62261 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sptbn1Q62261 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sptbn1Q62261 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sptbn1Q62261 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Sptbn1Q62261 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms