Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox17Q61473 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox17Q61473 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox17Q61473 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox17Q61473 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Sox17Q61473 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sox17Q61473 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox17Q61473 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox17Q61473 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox17Q61473 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sox17Q61473 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Sox17Q61473 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.57■■□□□ 1.04
Sox17Q61473 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox17Q61473 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sox17Q61473 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox17Q61473 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox17Q61473 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.55■■□□□ 1.04
Sox17Q61473 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox17Q61473 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox17Q61473 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox17Q61473 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.54■■□□□ 1.04
Sox17Q61473 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sox17Q61473 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sox17Q61473 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox17Q61473 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Sox17Q61473 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox17Q61473 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Sox17Q61473 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox17Q61473 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox17Q61473 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox17Q61473 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sox17Q61473 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Sox17Q61473 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox17Q61473 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox17Q61473 Gm30023-201ENSMUST00000197970 889 ntBASIC21.51■■□□□ 1.03
Sox17Q61473 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sox17Q61473 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox17Q61473 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox17Q61473 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.5■■□□□ 1.03
Sox17Q61473 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox17Q61473 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.5■■□□□ 1.03
Sox17Q61473 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox17Q61473 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox17Q61473 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox17Q61473 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox17Q61473 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox17Q61473 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.49■■□□□ 1.03
Sox17Q61473 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox17Q61473 Particl-201ENSMUST00000205370 1560 ntBASIC21.48■■□□□ 1.03
Sox17Q61473 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox17Q61473 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox17Q61473 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.48■■□□□ 1.03
Sox17Q61473 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox17Q61473 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox17Q61473 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
Sox17Q61473 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox17Q61473 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sox17Q61473 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox17Q61473 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.47■■□□□ 1.03
Sox17Q61473 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.46■■□□□ 1.03
Sox17Q61473 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox17Q61473 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox17Q61473 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox17Q61473 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox17Q61473 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox17Q61473 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox17Q61473 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sox17Q61473 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.45■■□□□ 1.02
Sox17Q61473 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Sox17Q61473 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.44■■□□□ 1.02
Sox17Q61473 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox17Q61473 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox17Q61473 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sox17Q61473 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox17Q61473 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox17Q61473 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sox17Q61473 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sox17Q61473 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Sox17Q61473 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox17Q61473 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox17Q61473 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox17Q61473 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Sox17Q61473 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox17Q61473 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.39■■□□□ 1.02
Sox17Q61473 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.39■■□□□ 1.02
Sox17Q61473 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox17Q61473 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Sox17Q61473 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox17Q61473 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox17Q61473 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox17Q61473 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox17Q61473 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox17Q61473 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 350.6 ms