Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
FntaQ61239 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
FntaQ61239 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
FntaQ61239 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FntaQ61239 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.33■■□□□ 1.49
FntaQ61239 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FntaQ61239 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FntaQ61239 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
FntaQ61239 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.31■■□□□ 1.48
FntaQ61239 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
FntaQ61239 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FntaQ61239 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FntaQ61239 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FntaQ61239 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
FntaQ61239 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FntaQ61239 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
FntaQ61239 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FntaQ61239 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
FntaQ61239 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FntaQ61239 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
FntaQ61239 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
FntaQ61239 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
FntaQ61239 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FntaQ61239 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FntaQ61239 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FntaQ61239 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.27■■□□□ 1.48
FntaQ61239 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FntaQ61239 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
FntaQ61239 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FntaQ61239 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
FntaQ61239 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.25■■□□□ 1.47
FntaQ61239 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.25■■□□□ 1.47
FntaQ61239 Gm30023-201ENSMUST00000197970 889 ntBASIC24.25■■□□□ 1.47
FntaQ61239 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FntaQ61239 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FntaQ61239 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.25■■□□□ 1.47
FntaQ61239 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.25■■□□□ 1.47
FntaQ61239 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FntaQ61239 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FntaQ61239 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
FntaQ61239 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
FntaQ61239 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
FntaQ61239 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
FntaQ61239 Particl-201ENSMUST00000205370 1560 ntBASIC24.21■■□□□ 1.47
FntaQ61239 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.19■■□□□ 1.46
FntaQ61239 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
FntaQ61239 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
FntaQ61239 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
FntaQ61239 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
FntaQ61239 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
FntaQ61239 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
FntaQ61239 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FntaQ61239 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FntaQ61239 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
FntaQ61239 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
FntaQ61239 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
FntaQ61239 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FntaQ61239 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
FntaQ61239 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
FntaQ61239 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
FntaQ61239 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
FntaQ61239 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FntaQ61239 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
FntaQ61239 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
FntaQ61239 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FntaQ61239 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
FntaQ61239 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FntaQ61239 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FntaQ61239 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FntaQ61239 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FntaQ61239 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
FntaQ61239 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FntaQ61239 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.1■■□□□ 1.45
FntaQ61239 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FntaQ61239 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FntaQ61239 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
FntaQ61239 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
FntaQ61239 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
FntaQ61239 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
FntaQ61239 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
FntaQ61239 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.08■■□□□ 1.45
FntaQ61239 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
FntaQ61239 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
FntaQ61239 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FntaQ61239 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
FntaQ61239 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
FntaQ61239 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
FntaQ61239 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 601.4 ms