Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Scnn1aQ61180 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Scnn1aQ61180 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Scnn1aQ61180 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Scnn1aQ61180 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Scnn1aQ61180 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Scnn1aQ61180 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Scnn1aQ61180 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Scnn1aQ61180 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Scnn1aQ61180 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Scnn1aQ61180 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Scnn1aQ61180 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Scnn1aQ61180 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Scnn1aQ61180 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Scnn1aQ61180 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scnn1aQ61180 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scnn1aQ61180 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Scnn1aQ61180 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.88■■□□□ 1.89
Scnn1aQ61180 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Scnn1aQ61180 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Scnn1aQ61180 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Scnn1aQ61180 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Scnn1aQ61180 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Scnn1aQ61180 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.86■■□□□ 1.89
Scnn1aQ61180 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Scnn1aQ61180 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Scnn1aQ61180 Gm27502-201ENSMUST00000183495 199 ntBASIC26.85■■□□□ 1.89
Scnn1aQ61180 Terc-201ENSMUST00000082862 423 ntBASIC26.85■■□□□ 1.89
Scnn1aQ61180 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Scnn1aQ61180 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Scnn1aQ61180 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
Scnn1aQ61180 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Scnn1aQ61180 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.83■■□□□ 1.89
Scnn1aQ61180 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scnn1aQ61180 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scnn1aQ61180 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.83■■□□□ 1.88
Scnn1aQ61180 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Scnn1aQ61180 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.82■■□□□ 1.88
Scnn1aQ61180 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Scnn1aQ61180 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.82■■□□□ 1.88
Scnn1aQ61180 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scnn1aQ61180 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Scnn1aQ61180 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scnn1aQ61180 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scnn1aQ61180 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Scnn1aQ61180 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Scnn1aQ61180 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Scnn1aQ61180 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scnn1aQ61180 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scnn1aQ61180 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scnn1aQ61180 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scnn1aQ61180 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Scnn1aQ61180 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.77■■□□□ 1.88
Scnn1aQ61180 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.77■■□□□ 1.88
Scnn1aQ61180 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Scnn1aQ61180 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.76■■□□□ 1.88
Scnn1aQ61180 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Scnn1aQ61180 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scnn1aQ61180 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scnn1aQ61180 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scnn1aQ61180 Gm14523-201ENSMUST00000117260 558 ntBASIC26.75■■□□□ 1.87
Scnn1aQ61180 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.75■■□□□ 1.87
Scnn1aQ61180 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scnn1aQ61180 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scnn1aQ61180 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Scnn1aQ61180 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Scnn1aQ61180 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Scnn1aQ61180 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.74■■□□□ 1.87
Scnn1aQ61180 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Scnn1aQ61180 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Scnn1aQ61180 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scnn1aQ61180 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Scnn1aQ61180 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
Scnn1aQ61180 Gm7332-201ENSMUST00000118351 454 ntBASIC26.71■■□□□ 1.87
Scnn1aQ61180 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.7■■□□□ 1.86
Scnn1aQ61180 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Scnn1aQ61180 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scnn1aQ61180 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Scnn1aQ61180 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Scnn1aQ61180 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scnn1aQ61180 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scnn1aQ61180 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scnn1aQ61180 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Scnn1aQ61180 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scnn1aQ61180 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.67■■□□□ 1.86
Scnn1aQ61180 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.65■■□□□ 1.86
Scnn1aQ61180 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Scnn1aQ61180 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Scnn1aQ61180 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Scnn1aQ61180 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Scnn1aQ61180 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Scnn1aQ61180 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scnn1aQ61180 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scnn1aQ61180 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scnn1aQ61180 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms