Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Trav7d-3Q5R1I1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Trav7d-3Q5R1I1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav7d-3Q5R1I1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav7d-3Q5R1I1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav7d-3Q5R1I1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.71■□□□□ 0.27
Trav7d-3Q5R1I1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7d-3Q5R1I1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
Trav7d-3Q5R1I1 Nkain2-201ENSMUST00000092602 558 ntBASIC16.71■□□□□ 0.27
Trav7d-3Q5R1I1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav7d-3Q5R1I1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav7d-3Q5R1I1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav7d-3Q5R1I1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7d-3Q5R1I1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav7d-3Q5R1I1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7d-3Q5R1I1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav7d-3Q5R1I1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav7d-3Q5R1I1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav7d-3Q5R1I1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav7d-3Q5R1I1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav7d-3Q5R1I1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.66■□□□□ 0.26
Trav7d-3Q5R1I1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7d-3Q5R1I1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav7d-3Q5R1I1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav7d-3Q5R1I1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7d-3Q5R1I1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7d-3Q5R1I1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7d-3Q5R1I1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7d-3Q5R1I1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7d-3Q5R1I1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav7d-3Q5R1I1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trav7d-3Q5R1I1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7d-3Q5R1I1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7d-3Q5R1I1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav7d-3Q5R1I1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav7d-3Q5R1I1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7d-3Q5R1I1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7d-3Q5R1I1 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.6■□□□□ 0.25
Trav7d-3Q5R1I1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7d-3Q5R1I1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7d-3Q5R1I1 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.59■□□□□ 0.25
Trav7d-3Q5R1I1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7d-3Q5R1I1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7d-3Q5R1I1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7d-3Q5R1I1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav7d-3Q5R1I1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav7d-3Q5R1I1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav7d-3Q5R1I1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav7d-3Q5R1I1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms