Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Bdp1Q571C7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.4■■□□□ 1.5
Bdp1Q571C7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.4■■□□□ 1.5
Bdp1Q571C7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Bdp1Q571C7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Bdp1Q571C7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Bdp1Q571C7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Bdp1Q571C7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Bdp1Q571C7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Bdp1Q571C7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Bdp1Q571C7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Bdp1Q571C7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Bdp1Q571C7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.38■■□□□ 1.49
Bdp1Q571C7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Bdp1Q571C7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Bdp1Q571C7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.37■■□□□ 1.49
Bdp1Q571C7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.37■■□□□ 1.49
Bdp1Q571C7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Bdp1Q571C7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Bdp1Q571C7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Bdp1Q571C7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Bdp1Q571C7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Bdp1Q571C7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Bdp1Q571C7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
Bdp1Q571C7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Bdp1Q571C7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Bdp1Q571C7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Bdp1Q571C7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Bdp1Q571C7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.33■■□□□ 1.48
Bdp1Q571C7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Bdp1Q571C7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Bdp1Q571C7 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.32■■□□□ 1.48
Bdp1Q571C7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.32■■□□□ 1.48
Bdp1Q571C7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Bdp1Q571C7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Bdp1Q571C7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.31■■□□□ 1.48
Bdp1Q571C7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.31■■□□□ 1.48
Bdp1Q571C7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Bdp1Q571C7 Gm9812-201ENSMUST00000061934 968 ntBASIC24.31■■□□□ 1.48
Bdp1Q571C7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Bdp1Q571C7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Bdp1Q571C7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Bdp1Q571C7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Bdp1Q571C7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Bdp1Q571C7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Bdp1Q571C7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Bdp1Q571C7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Bdp1Q571C7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Bdp1Q571C7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Bdp1Q571C7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.27■■□□□ 1.48
Bdp1Q571C7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Bdp1Q571C7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Bdp1Q571C7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Bdp1Q571C7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Bdp1Q571C7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.26■■□□□ 1.47
Bdp1Q571C7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Bdp1Q571C7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Bdp1Q571C7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Bdp1Q571C7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Bdp1Q571C7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.25■■□□□ 1.47
Bdp1Q571C7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.25■■□□□ 1.47
Bdp1Q571C7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Bdp1Q571C7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Bdp1Q571C7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Bdp1Q571C7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Bdp1Q571C7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Bdp1Q571C7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Bdp1Q571C7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Bdp1Q571C7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Bdp1Q571C7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.19■■□□□ 1.46
Bdp1Q571C7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Bdp1Q571C7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Bdp1Q571C7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.18■■□□□ 1.46
Bdp1Q571C7 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.17■■□□□ 1.46
Bdp1Q571C7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Bdp1Q571C7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
Bdp1Q571C7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.17■■□□□ 1.46
Bdp1Q571C7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Bdp1Q571C7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Bdp1Q571C7 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.14■■□□□ 1.45
Bdp1Q571C7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.13■■□□□ 1.45
Bdp1Q571C7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.13■■□□□ 1.45
Bdp1Q571C7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Bdp1Q571C7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Bdp1Q571C7 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.12■■□□□ 1.45
Bdp1Q571C7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Bdp1Q571C7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Bdp1Q571C7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Bdp1Q571C7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms