Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem40Q4FJU9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem40Q4FJU9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Tmem40Q4FJU9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Gm7332-201ENSMUST00000118351 454 ntBASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Gm27502-201ENSMUST00000183495 199 ntBASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Gm45364-201ENSMUST00000210883 159 ntBASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tmem40Q4FJU9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem40Q4FJU9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Tmem40Q4FJU9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem40Q4FJU9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem40Q4FJU9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem40Q4FJU9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.53■□□□□ 0.72
Tmem40Q4FJU9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.53■□□□□ 0.72
Tmem40Q4FJU9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem40Q4FJU9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem40Q4FJU9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem40Q4FJU9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.51■□□□□ 0.71
Tmem40Q4FJU9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem40Q4FJU9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem40Q4FJU9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem40Q4FJU9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem40Q4FJU9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem40Q4FJU9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem40Q4FJU9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem40Q4FJU9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.5■□□□□ 0.71
Tmem40Q4FJU9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem40Q4FJU9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem40Q4FJU9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.48■□□□□ 0.71
Tmem40Q4FJU9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tmem40Q4FJU9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tmem40Q4FJU9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.46■□□□□ 0.71
Tmem40Q4FJU9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.46■□□□□ 0.71
Tmem40Q4FJU9 Gm37136-201ENSMUST00000194368 194 ntBASIC19.46■□□□□ 0.71
Tmem40Q4FJU9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem40Q4FJU9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem40Q4FJU9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem40Q4FJU9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem40Q4FJU9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem40Q4FJU9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tmem40Q4FJU9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem40Q4FJU9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem40Q4FJU9 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.43■□□□□ 0.7
Tmem40Q4FJU9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem40Q4FJU9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem40Q4FJU9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem40Q4FJU9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem40Q4FJU9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem40Q4FJU9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem40Q4FJU9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tmem40Q4FJU9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem40Q4FJU9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem40Q4FJU9 Gm14523-201ENSMUST00000117260 558 ntBASIC19.38■□□□□ 0.69
Tmem40Q4FJU9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem40Q4FJU9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tmem40Q4FJU9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Tmem40Q4FJU9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem40Q4FJU9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.36■□□□□ 0.69
Tmem40Q4FJU9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tmem40Q4FJU9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem40Q4FJU9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tmem40Q4FJU9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.35■□□□□ 0.69
Tmem40Q4FJU9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.35■□□□□ 0.69
Tmem40Q4FJU9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem40Q4FJU9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem40Q4FJU9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem40Q4FJU9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem40Q4FJU9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tmem40Q4FJU9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms