Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.71■■□□□ 1.07
Khdc4Q3TCX3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Khdc4Q3TCX3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Khdc4Q3TCX3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Khdc4Q3TCX3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Khdc4Q3TCX3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.7■■□□□ 1.06
Khdc4Q3TCX3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Khdc4Q3TCX3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.69■■□□□ 1.06
Khdc4Q3TCX3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Khdc4Q3TCX3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Khdc4Q3TCX3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.68■■□□□ 1.06
Khdc4Q3TCX3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc4Q3TCX3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc4Q3TCX3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc4Q3TCX3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc4Q3TCX3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Khdc4Q3TCX3 Gm37136-201ENSMUST00000194368 194 ntBASIC21.66■■□□□ 1.06
Khdc4Q3TCX3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Khdc4Q3TCX3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Khdc4Q3TCX3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Khdc4Q3TCX3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Khdc4Q3TCX3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Khdc4Q3TCX3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Khdc4Q3TCX3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Khdc4Q3TCX3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Khdc4Q3TCX3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Khdc4Q3TCX3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.64■■□□□ 1.05
Khdc4Q3TCX3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Khdc4Q3TCX3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Khdc4Q3TCX3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Gm45364-201ENSMUST00000210883 159 ntBASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Khdc4Q3TCX3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Khdc4Q3TCX3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.62■■□□□ 1.05
Khdc4Q3TCX3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Khdc4Q3TCX3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Khdc4Q3TCX3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Khdc4Q3TCX3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Khdc4Q3TCX3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Khdc4Q3TCX3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.6■■□□□ 1.05
Khdc4Q3TCX3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Khdc4Q3TCX3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Khdc4Q3TCX3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Khdc4Q3TCX3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Khdc4Q3TCX3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Khdc4Q3TCX3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Khdc4Q3TCX3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Khdc4Q3TCX3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Khdc4Q3TCX3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Khdc4Q3TCX3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Khdc4Q3TCX3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Khdc4Q3TCX3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Khdc4Q3TCX3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Khdc4Q3TCX3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.55■■□□□ 1.04
Khdc4Q3TCX3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.54■■□□□ 1.04
Khdc4Q3TCX3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Khdc4Q3TCX3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Khdc4Q3TCX3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Khdc4Q3TCX3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Khdc4Q3TCX3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Khdc4Q3TCX3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Khdc4Q3TCX3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Khdc4Q3TCX3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Khdc4Q3TCX3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.51■■□□□ 1.03
Khdc4Q3TCX3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.51■■□□□ 1.03
Khdc4Q3TCX3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Khdc4Q3TCX3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms