Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim63Q38HM4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim63Q38HM4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim63Q38HM4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim63Q38HM4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim63Q38HM4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim63Q38HM4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim63Q38HM4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim63Q38HM4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Trim63Q38HM4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim63Q38HM4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim63Q38HM4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim63Q38HM4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim63Q38HM4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim63Q38HM4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim63Q38HM4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trim63Q38HM4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim63Q38HM4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim63Q38HM4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim63Q38HM4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim63Q38HM4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim63Q38HM4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.06■□□□□ 0.64
Trim63Q38HM4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim63Q38HM4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim63Q38HM4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim63Q38HM4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim63Q38HM4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim63Q38HM4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim63Q38HM4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trim63Q38HM4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Trim63Q38HM4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim63Q38HM4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim63Q38HM4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim63Q38HM4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim63Q38HM4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim63Q38HM4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trim63Q38HM4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim63Q38HM4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim63Q38HM4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.02■□□□□ 0.64
Trim63Q38HM4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim63Q38HM4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim63Q38HM4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim63Q38HM4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim63Q38HM4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.01■□□□□ 0.63
Trim63Q38HM4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim63Q38HM4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim63Q38HM4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim63Q38HM4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim63Q38HM4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim63Q38HM4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim63Q38HM4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim63Q38HM4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim63Q38HM4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim63Q38HM4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim63Q38HM4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim63Q38HM4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim63Q38HM4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim63Q38HM4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim63Q38HM4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Trim63Q38HM4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim63Q38HM4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim63Q38HM4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim63Q38HM4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim63Q38HM4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim63Q38HM4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim63Q38HM4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim63Q38HM4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim63Q38HM4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim63Q38HM4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim63Q38HM4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim63Q38HM4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim63Q38HM4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms