Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SgcgP82348 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SgcgP82348 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SgcgP82348 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.73■■□□□ 1.23
SgcgP82348 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SgcgP82348 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SgcgP82348 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SgcgP82348 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SgcgP82348 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SgcgP82348 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SgcgP82348 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.71■■□□□ 1.23
SgcgP82348 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
SgcgP82348 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.71■■□□□ 1.23
SgcgP82348 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SgcgP82348 Gm27502-201ENSMUST00000183495 199 ntBASIC22.7■■□□□ 1.22
SgcgP82348 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SgcgP82348 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SgcgP82348 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcgP82348 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SgcgP82348 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.68■■□□□ 1.22
SgcgP82348 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.68■■□□□ 1.22
SgcgP82348 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SgcgP82348 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SgcgP82348 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SgcgP82348 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SgcgP82348 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SgcgP82348 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcgP82348 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcgP82348 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcgP82348 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SgcgP82348 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.66■■□□□ 1.22
SgcgP82348 Gm12366-201ENSMUST00000121722 873 ntBASIC22.66■■□□□ 1.22
SgcgP82348 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.66■■□□□ 1.22
SgcgP82348 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcgP82348 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcgP82348 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.66■■□□□ 1.22
SgcgP82348 Gm5786-201ENSMUST00000085368 882 ntBASIC22.66■■□□□ 1.22
SgcgP82348 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SgcgP82348 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SgcgP82348 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SgcgP82348 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SgcgP82348 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.65■■□□□ 1.22
SgcgP82348 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.64■■□□□ 1.22
SgcgP82348 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SgcgP82348 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SgcgP82348 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SgcgP82348 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SgcgP82348 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SgcgP82348 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SgcgP82348 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SgcgP82348 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SgcgP82348 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SgcgP82348 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SgcgP82348 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SgcgP82348 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.61■■□□□ 1.21
SgcgP82348 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SgcgP82348 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SgcgP82348 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SgcgP82348 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SgcgP82348 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.58■■□□□ 1.21
SgcgP82348 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SgcgP82348 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SgcgP82348 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SgcgP82348 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SgcgP82348 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.57■■□□□ 1.2
SgcgP82348 Terc-201ENSMUST00000082862 423 ntBASIC22.57■■□□□ 1.2
SgcgP82348 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SgcgP82348 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SgcgP82348 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SgcgP82348 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SgcgP82348 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SgcgP82348 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SgcgP82348 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.55■■□□□ 1.2
SgcgP82348 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SgcgP82348 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SgcgP82348 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SgcgP82348 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.55■■□□□ 1.2
SgcgP82348 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
SgcgP82348 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
SgcgP82348 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SgcgP82348 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SgcgP82348 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SgcgP82348 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SgcgP82348 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SgcgP82348 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SgcgP82348 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.52■■□□□ 1.2
SgcgP82348 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SgcgP82348 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms