Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccr8P56484 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr8P56484 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccr8P56484 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr8P56484 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr8P56484 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr8P56484 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr8P56484 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr8P56484 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr8P56484 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr8P56484 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Ccr8P56484 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.66■□□□□ 0.74
Ccr8P56484 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 Gm11599-201ENSMUST00000118720 878 ntBASIC19.66■□□□□ 0.74
Ccr8P56484 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.66■□□□□ 0.74
Ccr8P56484 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr8P56484 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr8P56484 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Ccr8P56484 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr8P56484 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccr8P56484 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccr8P56484 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccr8P56484 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccr8P56484 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccr8P56484 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccr8P56484 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccr8P56484 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.62■□□□□ 0.73
Ccr8P56484 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr8P56484 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr8P56484 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr8P56484 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr8P56484 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccr8P56484 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccr8P56484 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccr8P56484 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccr8P56484 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccr8P56484 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccr8P56484 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccr8P56484 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccr8P56484 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccr8P56484 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Ccr8P56484 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccr8P56484 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.58■□□□□ 0.72
Ccr8P56484 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccr8P56484 Gm4799-201ENSMUST00000095396 657 ntBASIC19.57■□□□□ 0.72
Ccr8P56484 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccr8P56484 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccr8P56484 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccr8P56484 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.56■□□□□ 0.72
Ccr8P56484 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccr8P56484 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccr8P56484 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr8P56484 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccr8P56484 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccr8P56484 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccr8P56484 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr8P56484 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr8P56484 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr8P56484 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr8P56484 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccr8P56484 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccr8P56484 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccr8P56484 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.52■□□□□ 0.72
Ccr8P56484 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr8P56484 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr8P56484 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr8P56484 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr8P56484 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr8P56484 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccr8P56484 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ccr8P56484 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr8P56484 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccr8P56484 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr8P56484 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr8P56484 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccr8P56484 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccr8P56484 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr8P56484 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr8P56484 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccr8P56484 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr8P56484 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr8P56484 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ccr8P56484 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccr8P56484 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms