Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccl11P48298 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl11P48298 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.52■□□□□ 0.71
Ccl11P48298 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccl11P48298 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ccl11P48298 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccl11P48298 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ccl11P48298 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl11P48298 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccl11P48298 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl11P48298 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl11P48298 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Gm12366-201ENSMUST00000121722 873 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Gm5786-201ENSMUST00000085368 882 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl11P48298 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccl11P48298 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccl11P48298 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccl11P48298 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccl11P48298 Gm27502-201ENSMUST00000183495 199 ntBASIC19.44■□□□□ 0.7
Ccl11P48298 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.44■□□□□ 0.7
Ccl11P48298 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl11P48298 Terc-201ENSMUST00000082862 423 ntBASIC19.43■□□□□ 0.7
Ccl11P48298 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl11P48298 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl11P48298 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccl11P48298 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccl11P48298 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccl11P48298 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccl11P48298 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccl11P48298 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl11P48298 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl11P48298 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccl11P48298 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.37■□□□□ 0.69
Ccl11P48298 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl11P48298 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl11P48298 Gm7332-201ENSMUST00000118351 454 ntBASIC19.36■□□□□ 0.69
Ccl11P48298 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccl11P48298 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.35■□□□□ 0.69
Ccl11P48298 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms