Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox18P43680 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox18P43680 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox18P43680 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sox18P43680 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.23■■□□□ 1.15
Sox18P43680 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox18P43680 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox18P43680 Gm9812-201ENSMUST00000061934 968 ntBASIC22.23■■□□□ 1.15
Sox18P43680 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.23■■□□□ 1.15
Sox18P43680 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.22■■□□□ 1.15
Sox18P43680 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sox18P43680 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.22■■□□□ 1.15
Sox18P43680 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Sox18P43680 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sox18P43680 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox18P43680 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.21■■□□□ 1.15
Sox18P43680 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox18P43680 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox18P43680 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Sox18P43680 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sox18P43680 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Sox18P43680 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.19■■□□□ 1.14
Sox18P43680 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sox18P43680 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox18P43680 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sox18P43680 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.18■■□□□ 1.14
Sox18P43680 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Sox18P43680 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox18P43680 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Sox18P43680 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.17■■□□□ 1.14
Sox18P43680 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sox18P43680 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sox18P43680 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Sox18P43680 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.16■■□□□ 1.14
Sox18P43680 Gm15820-201ENSMUST00000201566 728 ntBASIC22.16■■□□□ 1.14
Sox18P43680 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox18P43680 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sox18P43680 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Sox18P43680 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sox18P43680 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sox18P43680 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Sox18P43680 Gm45102-201ENSMUST00000207427 857 ntBASIC22.14■■□□□ 1.13
Sox18P43680 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Sox18P43680 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox18P43680 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sox18P43680 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sox18P43680 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Sox18P43680 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.13■■□□□ 1.13
Sox18P43680 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox18P43680 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox18P43680 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.13■■□□□ 1.13
Sox18P43680 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox18P43680 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.12■■□□□ 1.13
Sox18P43680 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.12■■□□□ 1.13
Sox18P43680 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sox18P43680 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox18P43680 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sox18P43680 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sox18P43680 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sox18P43680 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sox18P43680 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sox18P43680 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox18P43680 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox18P43680 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox18P43680 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sox18P43680 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox18P43680 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.09■■□□□ 1.13
Sox18P43680 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox18P43680 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox18P43680 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.08■■□□□ 1.13
Sox18P43680 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sox18P43680 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Sox18P43680 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sox18P43680 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.07■■□□□ 1.12
Sox18P43680 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sox18P43680 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox18P43680 Gm14117-201ENSMUST00000122417 843 ntBASIC22.06■■□□□ 1.12
Sox18P43680 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.06■■□□□ 1.12
Sox18P43680 Amer2-203ENSMUST00000225247 2662 ntBASIC22.06■■□□□ 1.12
Sox18P43680 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox18P43680 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox18P43680 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox18P43680 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox18P43680 Gm43566-201ENSMUST00000196851 808 ntBASIC22.05■■□□□ 1.12
Sox18P43680 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.04■■□□□ 1.12
Sox18P43680 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox18P43680 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox18P43680 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox18P43680 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.03■■□□□ 1.12
Sox18P43680 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.03■■□□□ 1.12
Sox18P43680 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Sox18P43680 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox18P43680 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox18P43680 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Sox18P43680 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox18P43680 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox18P43680 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox18P43680 Gm13238-201ENSMUST00000117655 780 ntBASIC22.01■■□□□ 1.11
Sox18P43680 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox18P43680 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms