Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd27P41272 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd27P41272 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd27P41272 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd27P41272 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cd27P41272 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cd27P41272 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd27P41272 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cd27P41272 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd27P41272 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd27P41272 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd27P41272 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd27P41272 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd27P41272 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd27P41272 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd27P41272 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cd27P41272 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cd27P41272 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cd27P41272 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.51■□□□□ 0.55
Cd27P41272 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd27P41272 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd27P41272 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd27P41272 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cd27P41272 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.5■□□□□ 0.55
Cd27P41272 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd27P41272 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.5■□□□□ 0.55
Cd27P41272 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cd27P41272 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd27P41272 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd27P41272 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd27P41272 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd27P41272 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd27P41272 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd27P41272 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd27P41272 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd27P41272 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.48■□□□□ 0.55
Cd27P41272 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cd27P41272 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.48■□□□□ 0.55
Cd27P41272 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd27P41272 Gm4799-201ENSMUST00000095396 657 ntBASIC18.48■□□□□ 0.55
Cd27P41272 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cd27P41272 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd27P41272 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd27P41272 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cd27P41272 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cd27P41272 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.47■□□□□ 0.55
Cd27P41272 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd27P41272 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Gm45364-201ENSMUST00000210883 159 ntBASIC18.46■□□□□ 0.55
Cd27P41272 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd27P41272 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cd27P41272 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd27P41272 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd27P41272 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.44■□□□□ 0.54
Cd27P41272 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd27P41272 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.44■□□□□ 0.54
Cd27P41272 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.44■□□□□ 0.54
Cd27P41272 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd27P41272 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd27P41272 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd27P41272 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.43■□□□□ 0.54
Cd27P41272 Mir3960-201ENSMUST00000198213 73 ntBASIC18.43■□□□□ 0.54
Cd27P41272 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd27P41272 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cd27P41272 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.42■□□□□ 0.54
Cd27P41272 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd27P41272 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.41■□□□□ 0.54
Cd27P41272 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.41■□□□□ 0.54
Cd27P41272 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd27P41272 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd27P41272 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cd27P41272 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd27P41272 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd27P41272 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.39■□□□□ 0.53
Cd27P41272 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cd27P41272 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd27P41272 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd27P41272 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.37■□□□□ 0.53
Cd27P41272 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd27P41272 Gm9812-201ENSMUST00000061934 968 ntBASIC18.37■□□□□ 0.53
Cd27P41272 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd27P41272 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.37■□□□□ 0.53
Cd27P41272 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd27P41272 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd27P41272 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd27P41272 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cd27P41272 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd27P41272 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd27P41272 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.35■□□□□ 0.53
Cd27P41272 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cd27P41272 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.35■□□□□ 0.53
Cd27P41272 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.35■□□□□ 0.53
Cd27P41272 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.35■□□□□ 0.53
Cd27P41272 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd27P41272 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms