Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TbpP29037 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TbpP29037 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TbpP29037 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TbpP29037 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TbpP29037 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.03■□□□□ 0.32
TbpP29037 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.03■□□□□ 0.32
TbpP29037 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TbpP29037 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TbpP29037 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TbpP29037 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TbpP29037 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TbpP29037 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TbpP29037 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TbpP29037 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TbpP29037 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TbpP29037 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TbpP29037 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TbpP29037 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TbpP29037 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TbpP29037 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TbpP29037 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TbpP29037 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TbpP29037 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.98■□□□□ 0.31
TbpP29037 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TbpP29037 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TbpP29037 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TbpP29037 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TbpP29037 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TbpP29037 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TbpP29037 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TbpP29037 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.97■□□□□ 0.31
TbpP29037 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TbpP29037 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.97■□□□□ 0.31
TbpP29037 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TbpP29037 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TbpP29037 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TbpP29037 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TbpP29037 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TbpP29037 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TbpP29037 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TbpP29037 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TbpP29037 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.95■□□□□ 0.3
TbpP29037 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TbpP29037 Gm27322-201ENSMUST00000184007 104 ntBASIC16.95■□□□□ 0.3
TbpP29037 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TbpP29037 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.94■□□□□ 0.3
TbpP29037 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TbpP29037 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.94■□□□□ 0.3
TbpP29037 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.94■□□□□ 0.3
TbpP29037 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TbpP29037 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TbpP29037 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.93■□□□□ 0.3
TbpP29037 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TbpP29037 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TbpP29037 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TbpP29037 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TbpP29037 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TbpP29037 Peli2-204ENSMUST00000226513 1320 ntBASIC16.92■□□□□ 0.3
TbpP29037 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TbpP29037 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TbpP29037 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TbpP29037 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TbpP29037 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TbpP29037 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TbpP29037 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TbpP29037 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TbpP29037 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TbpP29037 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TbpP29037 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.89■□□□□ 0.29
TbpP29037 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TbpP29037 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TbpP29037 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms