Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cbx3P23198 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cbx3P23198 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cbx3P23198 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cbx3P23198 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cbx3P23198 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cbx3P23198 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cbx3P23198 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cbx3P23198 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cbx3P23198 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.75■□□□□ 0.91
Cbx3P23198 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cbx3P23198 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cbx3P23198 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cbx3P23198 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.74■□□□□ 0.91
Cbx3P23198 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cbx3P23198 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cbx3P23198 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Cbx3P23198 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.73■□□□□ 0.91
Cbx3P23198 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cbx3P23198 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cbx3P23198 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cbx3P23198 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cbx3P23198 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.72■□□□□ 0.91
Cbx3P23198 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cbx3P23198 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx3P23198 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx3P23198 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.71■□□□□ 0.91
Cbx3P23198 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.71■□□□□ 0.91
Cbx3P23198 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx3P23198 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx3P23198 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx3P23198 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cbx3P23198 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx3P23198 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx3P23198 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx3P23198 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx3P23198 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx3P23198 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.69■□□□□ 0.9
Cbx3P23198 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx3P23198 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx3P23198 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.67■□□□□ 0.9
Cbx3P23198 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx3P23198 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx3P23198 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cbx3P23198 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Cbx3P23198 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx3P23198 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cbx3P23198 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cbx3P23198 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx3P23198 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.65■□□□□ 0.9
Cbx3P23198 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx3P23198 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx3P23198 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx3P23198 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx3P23198 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cbx3P23198 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cbx3P23198 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cbx3P23198 Peli2-204ENSMUST00000226513 1320 ntBASIC20.63■□□□□ 0.89
Cbx3P23198 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cbx3P23198 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cbx3P23198 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cbx3P23198 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.62■□□□□ 0.89
Cbx3P23198 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cbx3P23198 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cbx3P23198 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cbx3P23198 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cbx3P23198 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cbx3P23198 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cbx3P23198 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cbx3P23198 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cbx3P23198 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cbx3P23198 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cbx3P23198 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cbx3P23198 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Cbx3P23198 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cbx3P23198 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cbx3P23198 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cbx3P23198 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cbx3P23198 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cbx3P23198 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Cbx3P23198 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cbx3P23198 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cbx3P23198 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cbx3P23198 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cbx3P23198 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cbx3P23198 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cbx3P23198 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cbx3P23198 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms