Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6dO55057 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6dO55057 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6dO55057 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6dO55057 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6dO55057 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Pde6dO55057 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6dO55057 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6dO55057 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pde6dO55057 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6dO55057 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6dO55057 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.12■□□□□ 0.49
Pde6dO55057 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6dO55057 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6dO55057 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6dO55057 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pde6dO55057 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6dO55057 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6dO55057 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6dO55057 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6dO55057 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6dO55057 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6dO55057 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6dO55057 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pde6dO55057 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.09■□□□□ 0.49
Pde6dO55057 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.09■□□□□ 0.49
Pde6dO55057 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6dO55057 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6dO55057 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pde6dO55057 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pde6dO55057 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.08■□□□□ 0.48
Pde6dO55057 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pde6dO55057 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6dO55057 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6dO55057 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6dO55057 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6dO55057 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pde6dO55057 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6dO55057 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6dO55057 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6dO55057 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Pde6dO55057 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6dO55057 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6dO55057 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6dO55057 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6dO55057 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6dO55057 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pde6dO55057 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pde6dO55057 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6dO55057 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6dO55057 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pde6dO55057 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6dO55057 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6dO55057 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6dO55057 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.02■□□□□ 0.47
Pde6dO55057 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pde6dO55057 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pde6dO55057 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pde6dO55057 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6dO55057 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6dO55057 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18■□□□□ 0.47
Pde6dO55057 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pde6dO55057 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6dO55057 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18■□□□□ 0.47
Pde6dO55057 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6dO55057 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6dO55057 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.99■□□□□ 0.47
Pde6dO55057 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pde6dO55057 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Pde6dO55057 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6dO55057 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6dO55057 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6dO55057 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6dO55057 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pde6dO55057 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pde6dO55057 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Particl-201ENSMUST00000205370 1560 ntBASIC17.97■□□□□ 0.47
Pde6dO55057 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pde6dO55057 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms