Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Capn1O35350 Gm45364-201ENSMUST00000210883 159 ntBASIC21.07■□□□□ 0.96
Capn1O35350 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.07■□□□□ 0.96
Capn1O35350 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Capn1O35350 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Capn1O35350 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Capn1O35350 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capn1O35350 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capn1O35350 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capn1O35350 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capn1O35350 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Capn1O35350 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Capn1O35350 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Capn1O35350 Gm9806-201ENSMUST00000051080 552 ntBASIC21.04■□□□□ 0.96
Capn1O35350 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Capn1O35350 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capn1O35350 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.03■□□□□ 0.96
Capn1O35350 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Capn1O35350 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.03■□□□□ 0.96
Capn1O35350 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.02■□□□□ 0.96
Capn1O35350 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Capn1O35350 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Capn1O35350 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Capn1O35350 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capn1O35350 Gm11687-201ENSMUST00000118911 886 ntBASIC21.01■□□□□ 0.95
Capn1O35350 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Capn1O35350 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Capn1O35350 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capn1O35350 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Capn1O35350 Gm13889-201ENSMUST00000099689 1386 ntBASIC21■□□□□ 0.95
Capn1O35350 Gm16437-201ENSMUST00000025669 507 ntBASIC21■□□□□ 0.95
Capn1O35350 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Capn1O35350 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.99■□□□□ 0.95
Capn1O35350 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Capn1O35350 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Capn1O35350 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Capn1O35350 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Capn1O35350 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Capn1O35350 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Capn1O35350 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Capn1O35350 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Capn1O35350 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.97■□□□□ 0.95
Capn1O35350 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Capn1O35350 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Capn1O35350 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Capn1O35350 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Capn1O35350 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Capn1O35350 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Capn1O35350 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Capn1O35350 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.95■□□□□ 0.94
Capn1O35350 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.95■□□□□ 0.94
Capn1O35350 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capn1O35350 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.94■□□□□ 0.94
Capn1O35350 Gm12366-201ENSMUST00000121722 873 ntBASIC20.94■□□□□ 0.94
Capn1O35350 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.94■□□□□ 0.94
Capn1O35350 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.94■□□□□ 0.94
Capn1O35350 Gm5786-201ENSMUST00000085368 882 ntBASIC20.94■□□□□ 0.94
Capn1O35350 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Capn1O35350 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Capn1O35350 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Capn1O35350 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Capn1O35350 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.93■□□□□ 0.94
Capn1O35350 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Capn1O35350 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Capn1O35350 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capn1O35350 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Capn1O35350 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capn1O35350 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capn1O35350 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Capn1O35350 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Capn1O35350 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Capn1O35350 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Capn1O35350 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.9■□□□□ 0.94
Capn1O35350 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capn1O35350 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.89■□□□□ 0.93
Capn1O35350 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Capn1O35350 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Capn1O35350 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Capn1O35350 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Capn1O35350 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Capn1O35350 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.87■□□□□ 0.93
Capn1O35350 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms