Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.54■□□□□ 0.56
Ndufb11O09111 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.54■□□□□ 0.56
Ndufb11O09111 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufb11O09111 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufb11O09111 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufb11O09111 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufb11O09111 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndufb11O09111 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndufb11O09111 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Ndufb11O09111 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufb11O09111 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ndufb11O09111 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufb11O09111 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufb11O09111 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufb11O09111 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufb11O09111 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufb11O09111 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufb11O09111 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ndufb11O09111 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufb11O09111 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufb11O09111 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Ndufb11O09111 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.49■□□□□ 0.55
Ndufb11O09111 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufb11O09111 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.48■□□□□ 0.55
Ndufb11O09111 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.48■□□□□ 0.55
Ndufb11O09111 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ndufb11O09111 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ndufb11O09111 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndufb11O09111 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Ndufb11O09111 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndufb11O09111 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufb11O09111 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufb11O09111 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufb11O09111 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ndufb11O09111 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ndufb11O09111 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ndufb11O09111 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndufb11O09111 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndufb11O09111 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ndufb11O09111 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Rab21-202ENSMUST00000218831 843 ntBASIC18.45■□□□□ 0.54
Ndufb11O09111 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufb11O09111 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.45■□□□□ 0.54
Ndufb11O09111 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Ndufb11O09111 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufb11O09111 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufb11O09111 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufb11O09111 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufb11O09111 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufb11O09111 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufb11O09111 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.43■□□□□ 0.54
Ndufb11O09111 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufb11O09111 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ndufb11O09111 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufb11O09111 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufb11O09111 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufb11O09111 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufb11O09111 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ndufb11O09111 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ndufb11O09111 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufb11O09111 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufb11O09111 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufb11O09111 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Ndufb11O09111 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.41■□□□□ 0.54
Ndufb11O09111 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufb11O09111 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufb11O09111 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufb11O09111 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufb11O09111 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Ndufb11O09111 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufb11O09111 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufb11O09111 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufb11O09111 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ndufb11O09111 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ndufb11O09111 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ndufb11O09111 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ndufb11O09111 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufb11O09111 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufb11O09111 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufb11O09111 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufb11O09111 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufb11O09111 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufb11O09111 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufb11O09111 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufb11O09111 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ndufb11O09111 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndufb11O09111 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufb11O09111 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufb11O09111 Gm25238-201ENSMUST00000174914 89 ntBASIC18.37■□□□□ 0.53
Ndufb11O09111 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.37■□□□□ 0.53
Ndufb11O09111 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ndufb11O09111 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufb11O09111 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.37■□□□□ 0.53
Ndufb11O09111 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms