Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Herc1E9PZP8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.76□□□□□ -0.21
Herc1E9PZP8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Herc1E9PZP8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Herc1E9PZP8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.75□□□□□ -0.21
Herc1E9PZP8 Gm30023-201ENSMUST00000197970 889 ntBASIC13.75□□□□□ -0.21
Herc1E9PZP8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Herc1E9PZP8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Herc1E9PZP8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Herc1E9PZP8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.74□□□□□ -0.21
Herc1E9PZP8 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.74□□□□□ -0.21
Herc1E9PZP8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Herc1E9PZP8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.73□□□□□ -0.21
Herc1E9PZP8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Herc1E9PZP8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Herc1E9PZP8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Herc1E9PZP8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Herc1E9PZP8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Herc1E9PZP8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Herc1E9PZP8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Herc1E9PZP8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Herc1E9PZP8 Gm27011-201ENSMUST00000182352 972 ntBASIC13.71□□□□□ -0.22
Herc1E9PZP8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Herc1E9PZP8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herc1E9PZP8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Herc1E9PZP8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Herc1E9PZP8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Herc1E9PZP8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.69□□□□□ -0.22
Herc1E9PZP8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Herc1E9PZP8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.69□□□□□ -0.22
Herc1E9PZP8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herc1E9PZP8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Herc1E9PZP8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Herc1E9PZP8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.68□□□□□ -0.22
Herc1E9PZP8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Herc1E9PZP8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Herc1E9PZP8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Herc1E9PZP8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Herc1E9PZP8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.66□□□□□ -0.22
Herc1E9PZP8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.66□□□□□ -0.22
Herc1E9PZP8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Herc1E9PZP8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Herc1E9PZP8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herc1E9PZP8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herc1E9PZP8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Herc1E9PZP8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Herc1E9PZP8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Herc1E9PZP8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Herc1E9PZP8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Herc1E9PZP8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Herc1E9PZP8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Herc1E9PZP8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herc1E9PZP8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc1E9PZP8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herc1E9PZP8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Herc1E9PZP8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herc1E9PZP8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.62□□□□□ -0.23
Herc1E9PZP8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.62□□□□□ -0.23
Herc1E9PZP8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.61□□□□□ -0.23
Herc1E9PZP8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
Herc1E9PZP8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Herc1E9PZP8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.59□□□□□ -0.23
Herc1E9PZP8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Herc1E9PZP8 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.59□□□□□ -0.23
Herc1E9PZP8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Herc1E9PZP8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Herc1E9PZP8 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.59□□□□□ -0.23
Herc1E9PZP8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms