Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-2D3Z4R4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nkx6-2D3Z4R4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx6-2D3Z4R4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx6-2D3Z4R4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-2D3Z4R4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-2D3Z4R4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.71■□□□□ 0.59
Nkx6-2D3Z4R4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx6-2D3Z4R4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx6-2D3Z4R4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-2D3Z4R4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-2D3Z4R4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-2D3Z4R4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx6-2D3Z4R4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx6-2D3Z4R4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-2D3Z4R4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx6-2D3Z4R4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-2D3Z4R4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx6-2D3Z4R4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkx6-2D3Z4R4 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.67■□□□□ 0.58
Nkx6-2D3Z4R4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-2D3Z4R4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-2D3Z4R4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx6-2D3Z4R4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx6-2D3Z4R4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx6-2D3Z4R4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx6-2D3Z4R4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx6-2D3Z4R4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx6-2D3Z4R4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx6-2D3Z4R4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx6-2D3Z4R4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx6-2D3Z4R4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-2D3Z4R4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-2D3Z4R4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nkx6-2D3Z4R4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx6-2D3Z4R4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx6-2D3Z4R4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx6-2D3Z4R4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-2D3Z4R4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-2D3Z4R4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx6-2D3Z4R4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx6-2D3Z4R4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx6-2D3Z4R4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx6-2D3Z4R4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx6-2D3Z4R4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx6-2D3Z4R4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx6-2D3Z4R4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-2D3Z4R4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nkx6-2D3Z4R4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx6-2D3Z4R4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nkx6-2D3Z4R4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nkx6-2D3Z4R4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx6-2D3Z4R4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nkx6-2D3Z4R4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx6-2D3Z4R4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx6-2D3Z4R4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms