Protein–RNA interactions for Protein: A7VMS3

H2-M5, Histocompatibility 2, M region locus 5, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-M5A7VMS3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2-M5A7VMS3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2-M5A7VMS3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H2-M5A7VMS3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Gm11687-201ENSMUST00000118911 886 ntBASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Gm9806-201ENSMUST00000051080 552 ntBASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.35■□□□□ 0.69
H2-M5A7VMS3 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Gm45364-201ENSMUST00000210883 159 ntBASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2-M5A7VMS3 Scarna2-201ENSMUST00000157560 414 ntBASIC19.33■□□□□ 0.68
H2-M5A7VMS3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
H2-M5A7VMS3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2-M5A7VMS3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2-M5A7VMS3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2-M5A7VMS3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2-M5A7VMS3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.32■□□□□ 0.68
H2-M5A7VMS3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2-M5A7VMS3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2-M5A7VMS3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2-M5A7VMS3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
H2-M5A7VMS3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H2-M5A7VMS3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2-M5A7VMS3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H2-M5A7VMS3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H2-M5A7VMS3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2-M5A7VMS3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Gm9812-201ENSMUST00000061934 968 ntBASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H2-M5A7VMS3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2-M5A7VMS3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
H2-M5A7VMS3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.26■□□□□ 0.67
H2-M5A7VMS3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2-M5A7VMS3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
H2-M5A7VMS3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.25■□□□□ 0.67
H2-M5A7VMS3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.25■□□□□ 0.67
H2-M5A7VMS3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2-M5A7VMS3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2-M5A7VMS3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Gm16437-201ENSMUST00000025669 507 ntBASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2-M5A7VMS3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2-M5A7VMS3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.22■□□□□ 0.67
H2-M5A7VMS3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2-M5A7VMS3 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.22■□□□□ 0.67
H2-M5A7VMS3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2-M5A7VMS3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2-M5A7VMS3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
H2-M5A7VMS3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.21■□□□□ 0.67
H2-M5A7VMS3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
H2-M5A7VMS3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.21■□□□□ 0.67
H2-M5A7VMS3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
H2-M5A7VMS3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.2■□□□□ 0.66
H2-M5A7VMS3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
H2-M5A7VMS3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2-M5A7VMS3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
H2-M5A7VMS3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2-M5A7VMS3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2-M5A7VMS3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2-M5A7VMS3 Cap2-205ENSMUST00000225824 1634 ntBASIC19.18■□□□□ 0.66
H2-M5A7VMS3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2-M5A7VMS3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2-M5A7VMS3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2-M5A7VMS3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2-M5A7VMS3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2-M5A7VMS3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2-M5A7VMS3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2-M5A7VMS3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.16■□□□□ 0.66
H2-M5A7VMS3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms