Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Nkain2-201ENSMUST00000092602 558 ntBASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Vma21-psA0A140T8R2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vma21-psA0A140T8R2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vma21-psA0A140T8R2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vma21-psA0A140T8R2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vma21-psA0A140T8R2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Vma21-psA0A140T8R2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vma21-psA0A140T8R2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Vma21-psA0A140T8R2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vma21-psA0A140T8R2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vma21-psA0A140T8R2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vma21-psA0A140T8R2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vma21-psA0A140T8R2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vma21-psA0A140T8R2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vma21-psA0A140T8R2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vma21-psA0A140T8R2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vma21-psA0A140T8R2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vma21-psA0A140T8R2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vma21-psA0A140T8R2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vma21-psA0A140T8R2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vma21-psA0A140T8R2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vma21-psA0A140T8R2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Vma21-psA0A140T8R2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.14■□□□□ 0.49
Vma21-psA0A140T8R2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.13■□□□□ 0.49
Vma21-psA0A140T8R2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vma21-psA0A140T8R2 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.11■□□□□ 0.49
Vma21-psA0A140T8R2 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.11■□□□□ 0.49
Vma21-psA0A140T8R2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vma21-psA0A140T8R2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vma21-psA0A140T8R2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Vma21-psA0A140T8R2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.09■□□□□ 0.49
Vma21-psA0A140T8R2 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.09■□□□□ 0.49
Vma21-psA0A140T8R2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vma21-psA0A140T8R2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vma21-psA0A140T8R2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vma21-psA0A140T8R2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vma21-psA0A140T8R2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vma21-psA0A140T8R2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms