Protein–RNA interactions for Protein: A0A0N4SV92

Duxf3, Double homeobox family member 3, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Duxf3A0A0N4SV92 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Duxf3A0A0N4SV92 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.92■■■□□ 2.22
Duxf3A0A0N4SV92 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.91■■■□□ 2.22
Duxf3A0A0N4SV92 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Duxf3A0A0N4SV92 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Duxf3A0A0N4SV92 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Duxf3A0A0N4SV92 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Duxf3A0A0N4SV92 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.89■■■□□ 2.22
Duxf3A0A0N4SV92 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Duxf3A0A0N4SV92 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Duxf3A0A0N4SV92 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Duxf3A0A0N4SV92 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Duxf3A0A0N4SV92 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.88■■■□□ 2.21
Duxf3A0A0N4SV92 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Duxf3A0A0N4SV92 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Duxf3A0A0N4SV92 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.87■■■□□ 2.21
Duxf3A0A0N4SV92 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Duxf3A0A0N4SV92 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Duxf3A0A0N4SV92 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.86■■■□□ 2.21
Duxf3A0A0N4SV92 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Duxf3A0A0N4SV92 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Duxf3A0A0N4SV92 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Duxf3A0A0N4SV92 Gm8503-201ENSMUST00000118131 455 ntBASIC28.85■■■□□ 2.21
Duxf3A0A0N4SV92 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Duxf3A0A0N4SV92 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.85■■■□□ 2.21
Duxf3A0A0N4SV92 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.84■■■□□ 2.21
Duxf3A0A0N4SV92 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Duxf3A0A0N4SV92 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Duxf3A0A0N4SV92 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Duxf3A0A0N4SV92 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Duxf3A0A0N4SV92 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Duxf3A0A0N4SV92 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Duxf3A0A0N4SV92 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Duxf3A0A0N4SV92 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Duxf3A0A0N4SV92 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Duxf3A0A0N4SV92 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Duxf3A0A0N4SV92 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Duxf3A0A0N4SV92 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Duxf3A0A0N4SV92 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.78■■■□□ 2.2
Duxf3A0A0N4SV92 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Duxf3A0A0N4SV92 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Duxf3A0A0N4SV92 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Duxf3A0A0N4SV92 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Duxf3A0A0N4SV92 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Duxf3A0A0N4SV92 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.2
Duxf3A0A0N4SV92 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Duxf3A0A0N4SV92 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Duxf3A0A0N4SV92 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Duxf3A0A0N4SV92 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.76■■■□□ 2.19
Duxf3A0A0N4SV92 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Duxf3A0A0N4SV92 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Duxf3A0A0N4SV92 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Duxf3A0A0N4SV92 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Duxf3A0A0N4SV92 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Duxf3A0A0N4SV92 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Duxf3A0A0N4SV92 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Duxf3A0A0N4SV92 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.73■■■□□ 2.19
Duxf3A0A0N4SV92 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Duxf3A0A0N4SV92 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.73■■■□□ 2.19
Duxf3A0A0N4SV92 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Duxf3A0A0N4SV92 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Duxf3A0A0N4SV92 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Duxf3A0A0N4SV92 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Duxf3A0A0N4SV92 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Duxf3A0A0N4SV92 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Duxf3A0A0N4SV92 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Duxf3A0A0N4SV92 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Duxf3A0A0N4SV92 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Duxf3A0A0N4SV92 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Duxf3A0A0N4SV92 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Duxf3A0A0N4SV92 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Duxf3A0A0N4SV92 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Duxf3A0A0N4SV92 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Duxf3A0A0N4SV92 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.68■■■□□ 2.18
Duxf3A0A0N4SV92 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Duxf3A0A0N4SV92 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.67■■■□□ 2.18
Duxf3A0A0N4SV92 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Duxf3A0A0N4SV92 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Duxf3A0A0N4SV92 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Duxf3A0A0N4SV92 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Duxf3A0A0N4SV92 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.66■■■□□ 2.18
Duxf3A0A0N4SV92 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Duxf3A0A0N4SV92 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Duxf3A0A0N4SV92 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Duxf3A0A0N4SV92 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Duxf3A0A0N4SV92 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Duxf3A0A0N4SV92 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Duxf3A0A0N4SV92 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Duxf3A0A0N4SV92 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Duxf3A0A0N4SV92 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms