Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv8-27A0A0G2JF28 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Igkv8-27A0A0G2JF28 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv8-27A0A0G2JF28 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv8-27A0A0G2JF28 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv8-27A0A0G2JF28 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv8-27A0A0G2JF28 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Igkv8-27A0A0G2JF28 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv8-27A0A0G2JF28 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv8-27A0A0G2JF28 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm25262-201ENSMUST00000174934 133 ntBASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv8-27A0A0G2JF28 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Igkv8-27A0A0G2JF28 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.34□□□□□ -0.11
Igkv8-27A0A0G2JF28 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv8-27A0A0G2JF28 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv8-27A0A0G2JF28 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-27A0A0G2JF28 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-27A0A0G2JF28 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.31□□□□□ -0.12
Igkv8-27A0A0G2JF28 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms