RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C DRS1P32892 752 aaKnown RBP11.64□□□□□ -0.55
TPM1YNL079C MTC1P47018 478 aaKnown RBP11.6□□□□□ -0.55
TPM1YNL079C BFR2Q06631 534 aaKnown RBP10.06□□□□□ -0.8
TPM1YNL079C DIP2Q12220 943 aaPredicted RBP9.93□□□□□ -0.82
TPM1YNL079C AVT3P36062 692 aa9.79□□□□□ -0.84
TPM1YNL079C FAP1P53971 965 aa9.51□□□□□ -0.89
TPM1YNL079C TFA1P36100 482 aa9.48□□□□□ -0.89
TPM1YNL079C ISW2Q08773 1120 aa9.43□□□□□ -0.9
TPM1YNL079C RSE1Q04693 1361 aaKnown RBP9.36□□□□□ -0.91
TPM1YNL079C PRI1P10363 409 aa9.33□□□□□ -0.92
TPM1YNL079C RPG1P38249 964 aaKnown RBP9.31□□□□□ -0.92
TPM1YNL079C AAD16Q02895 342 aa9.17□□□□□ -0.94
TPM1YNL079C RPL17AP05740 184 aaKnown RBP9□□□□□ -0.97
TPM1YNL079C RPL17BP46990 184 aaKnown RBP9□□□□□ -0.97
TPM1YNL079C PRY3P47033 881 aa8.9□□□□□ -0.98
TPM1YNL079C REB1P21538 810 aa8.88□□□□□ -0.99
TPM1YNL079C TSR3Q12094 313 aaKnown RBP8.86□□□□□ -0.99
TPM1YNL079C SPT21P35209 758 aa8.69□□□□□ -1.02
TPM1YNL079C RIM101P33400 625 aa8.57□□□□□ -1.04
TPM1YNL079C MRPL32P25348 183 aa8.5□□□□□ -1.05
TPM1YNL079C YCK3P39962 524 aa8.46□□□□□ -1.06
TPM1YNL079C YKR023WP36119 530 aaKnown RBP8.41□□□□□ -1.06
TPM1YNL079C HAA1Q12753 694 aaKnown RBP8.41□□□□□ -1.06
TPM1YNL079C OXP1P28273 1286 aa8.31□□□□□ -1.08
TPM1YNL079C PTP3P40048 928 aa8.25□□□□□ -1.09
TPM1YNL079C HOP09932 586 aa8.24□□□□□ -1.09
TPM1YNL079C TFC8Q12308 588 aa8.24□□□□□ -1.09
TPM1YNL079C CDC27P38042 758 aa8.23□□□□□ -1.09
TPM1YNL079C DCD1P06773 312 aa8.17□□□□□ -1.1
TPM1YNL079C SSP1P38871 571 aa8.17□□□□□ -1.1
TPM1YNL079C YIL055CP40523 627 aaKnown RBP8.17□□□□□ -1.1
TPM1YNL079C YAH1Q12184 172 aaKnown RBP8.16□□□□□ -1.1
TPM1YNL079C YLR271WQ06152 274 aa8.08□□□□□ -1.12
TPM1YNL079C RSM7P47150 247 aa8.06□□□□□ -1.12
TPM1YNL079C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
TPM1YNL079C BCH2P36122 765 aa8.01□□□□□ -1.13
TPM1YNL079C RQC2Q12532 1038 aaKnown RBP7.99□□□□□ -1.13
TPM1YNL079C YGL015CP33199 130 aa7.93□□□□□ -1.14
TPM1YNL079C AI2P03876 854 aa7.91□□□□□ -1.14
TPM1YNL079C MGA2P40578 1113 aa7.9□□□□□ -1.14
TPM1YNL079C MAP2P38174 421 aaKnown RBP7.88□□□□□ -1.15
TPM1YNL079C UBP10P53874 792 aaPredicted RBP7.88□□□□□ -1.15
TPM1YNL079C PSD2P53037 1138 aaKnown RBP7.87□□□□□ -1.15
TPM1YNL079C BBC1P47068 1157 aa7.86□□□□□ -1.15
TPM1YNL079C SCY1P53009 804 aa7.86□□□□□ -1.15
TPM1YNL079C EPS1P40557 701 aa7.85□□□□□ -1.15
TPM1YNL079C CST9Q06032 482 aa7.83□□□□□ -1.16
TPM1YNL079C BDF1P35817 686 aa7.8□□□□□ -1.16
TPM1YNL079C DMA1P38823 416 aa7.8□□□□□ -1.16
TPM1YNL079C SLX5P32828 619 aaKnown RBP7.71□□□□□ -1.18
TPM1YNL079C MRM1P25270 412 aa7.67□□□□□ -1.18
TPM1YNL079C RTG3P38165 486 aa7.57□□□□□ -1.2
TPM1YNL079C RCR1P38212 213 aa7.57□□□□□ -1.2
TPM1YNL079C TIF4632P39936 914 aaKnown RBP7.56□□□□□ -1.2
TPM1YNL079C RAM2P29703 316 aa7.55□□□□□ -1.2
TPM1YNL079C TGL3P40308 642 aa7.52□□□□□ -1.21
TPM1YNL079C VPS29P38759 282 aa7.5□□□□□ -1.21
TPM1YNL079C MAK11P20484 414 aaKnown RBP7.43□□□□□ -1.22
TPM1YNL079C NSR1P27476 414 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22 RIP-Chip
TPM1YNL079C YMR1P47147 688 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22 RIP-Chip
TPM1YNL079C SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.22
TPM1YNL079C STS1P38637 319 aa7.39□□□□□ -1.23
TPM1YNL079C YOR238WQ08634 303 aa7.39□□□□□ -1.23
TPM1YNL079C DBP1P24784 617 aaKnown RBP7.38□□□□□ -1.23
TPM1YNL079C SET1P38827 1080 aaKnown RBP7.38□□□□□ -1.23
TPM1YNL079C YAP5P40574 245 aa7.38□□□□□ -1.23
TPM1YNL079C YFR006WP43590 535 aa7.35□□□□□ -1.23
TPM1YNL079C COQ8P27697 501 aa7.32□□□□□ -1.24
TPM1YNL079C MST1P07236 462 aa7.31□□□□□ -1.24
TPM1YNL079C PIB1Q06651 286 aa7.31□□□□□ -1.24
TPM1YNL079C MIF2P35201 549 aa7.29□□□□□ -1.24
TPM1YNL079C EDS1P38073 919 aa7.27□□□□□ -1.25
TPM1YNL079C YPR148CQ06523 435 aa7.27□□□□□ -1.25
TPM1YNL079C NOP53Q12080 455 aaKnown RBP7.27□□□□□ -1.25
TPM1YNL079C IFH1P39520 1085 aa7.26□□□□□ -1.25
TPM1YNL079C VMA1P17255 1071 aaKnown RBP7.24□□□□□ -1.25
TPM1YNL079C VPS70P47161 811 aa7.22□□□□□ -1.25
TPM1YNL079C PTC3P34221 468 aaKnown RBP7.21□□□□□ -1.26
TPM1YNL079C CKB1P43639 278 aa7.19□□□□□ -1.26
TPM1YNL079C SAM3Q08986 587 aa7.18□□□□□ -1.26
TPM1YNL079C GTT3P39996 337 aa7.17□□□□□ -1.26
TPM1YNL079C LEU3P08638 886 aa7.13□□□□□ -1.27
TPM1YNL079C GRE2Q12068 342 aaKnown RBP7.13□□□□□ -1.27
TPM1YNL079C ATH1P48016 1211 aa7.11□□□□□ -1.27
TPM1YNL079C GYP5Q12344 894 aa7.11□□□□□ -1.27
TPM1YNL079C SPB4P25808 606 aaPredicted RBP7.1□□□□□ -1.27
TPM1YNL079C GUT1P32190 709 aa7.1□□□□□ -1.27
TPM1YNL079C YOL036WQ08206 761 aa7.09□□□□□ -1.27
TPM1YNL079C REF2P42073 533 aaPredicted RBP7.07□□□□□ -1.28
TPM1YNL079C SET4P42948 560 aa7.07□□□□□ -1.28
TPM1YNL079C PBS2P08018 668 aa7.06□□□□□ -1.28
TPM1YNL079C WSC3Q12215 556 aa7.06□□□□□ -1.28
TPM1YNL079C LEO1P38439 464 aa7.05□□□□□ -1.28
TPM1YNL079C MSB4Q12317 492 aa7.05□□□□□ -1.28
TPM1YNL079C ABP1P15891 592 aaKnown RBP7.04□□□□□ -1.28
TPM1YNL079C DSF2P38213 736 aa7.04□□□□□ -1.28
TPM1YNL079C YBL029C-AQ3E756 94 aa7.04□□□□□ -1.28
TPM1YNL079C DCW1P36091 449 aa7.03□□□□□ -1.28
TPM1YNL079C UBP9P39967 754 aa7.03□□□□□ -1.28
TPM1YNL079C SOL3P38858 249 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms