RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W RQC2Q12532 1038 aaKnown RBP14.83□□□□□ -0.04
SFP1YLR403W BFR2Q06631 534 aaKnown RBP14.64□□□□□ -0.07
SFP1YLR403W URN1Q06525 465 aaKnown RBP13.38□□□□□ -0.27
SFP1YLR403W NOP2P40991 618 aaKnown RBP13.24□□□□□ -0.29
SFP1YLR403W TAF7Q05021 590 aa13.16□□□□□ -0.3
SFP1YLR403W EBP2P36049 427 aaKnown RBP13.14□□□□□ -0.31
SFP1YLR403W CAB3P36076 571 aa13.05□□□□□ -0.32
SFP1YLR403W SIS2P36024 562 aa13□□□□□ -0.33
SFP1YLR403W NSR1P27476 414 aaKnown RBP RIP-Chip data12.62□□□□□ -0.39not detected
SFP1YLR403W AVT3P36062 692 aa12.6□□□□□ -0.39
SFP1YLR403W YFR016CP43597 1233 aaKnown RBP12.58□□□□□ -0.39
SFP1YLR403W YPR148CQ06523 435 aa12.46□□□□□ -0.41
SFP1YLR403W RPS0BP46654 252 aaKnown RBP12.31□□□□□ -0.44
SFP1YLR403W DIP2Q12220 943 aaPredicted RBP12.17□□□□□ -0.46
SFP1YLR403W KRI1P42846 591 aaKnown RBP12.15□□□□□ -0.46
SFP1YLR403W CWC22P53333 577 aaKnown RBP12.13□□□□□ -0.47
SFP1YLR403W YRB30P53107 440 aaPredicted RBP12.1□□□□□ -0.47
SFP1YLR403W TFA1P36100 482 aa12.06□□□□□ -0.48
SFP1YLR403W TCB2P48231 1178 aa11.92□□□□□ -0.5
SFP1YLR403W SKI3P17883 1432 aaKnown RBP11.91□□□□□ -0.5
SFP1YLR403W RSE1Q04693 1361 aaKnown RBP11.9□□□□□ -0.5
SFP1YLR403W IOC4Q04213 475 aa11.83□□□□□ -0.51
SFP1YLR403W NAP1P25293 417 aaKnown RBP11.82□□□□□ -0.52
SFP1YLR403W ENV11P53246 860 aa11.81□□□□□ -0.52
SFP1YLR403W DEF1P35732 738 aaKnown RBP11.79□□□□□ -0.52
SFP1YLR403W LEO1P38439 464 aa11.73□□□□□ -0.53
SFP1YLR403W AIM44Q99299 758 aa11.72□□□□□ -0.53
SFP1YLR403W MNN4P36044 1178 aa11.71□□□□□ -0.54
SFP1YLR403W NUG1P40010 520 aaKnown RBP11.71□□□□□ -0.54
SFP1YLR403W PSH1Q12161 406 aa11.67□□□□□ -0.54
SFP1YLR403W SPT7P35177 1332 aa11.67□□□□□ -0.54
SFP1YLR403W NOP53Q12080 455 aaKnown RBP11.66□□□□□ -0.54
SFP1YLR403W RLF2Q12495 606 aa11.62□□□□□ -0.55
SFP1YLR403W TCB3Q03640 1545 aaKnown RBP11.59□□□□□ -0.55
SFP1YLR403W SPA2P23201 1466 aaKnown RBP11.59□□□□□ -0.55
SFP1YLR403W ENP1P38333 483 aaKnown RBP11.58□□□□□ -0.56
SFP1YLR403W SPT21P35209 758 aa11.58□□□□□ -0.56
SFP1YLR403W YGR130CP53278 816 aa11.58□□□□□ -0.56
SFP1YLR403W SEC3P33332 1336 aaKnown RBP11.57□□□□□ -0.56
SFP1YLR403W FPR3P38911 411 aaKnown RBP11.55□□□□□ -0.56
SFP1YLR403W QCR6P00127 147 aa11.54□□□□□ -0.56
SFP1YLR403W CLC1P17891 233 aa11.53□□□□□ -0.56
SFP1YLR403W DRS1P32892 752 aaKnown RBP11.53□□□□□ -0.56
SFP1YLR403W SPT2P06843 333 aaPredicted RBP11.49□□□□□ -0.57
SFP1YLR403W RLP24Q07915 199 aaKnown RBP11.48□□□□□ -0.57
SFP1YLR403W FPR4Q06205 392 aaPredicted RBP11.47□□□□□ -0.57
SFP1YLR403W SGS1P35187 1447 aa11.45□□□□□ -0.58
SFP1YLR403W RNA1P11745 407 aaKnown RBP11.44□□□□□ -0.58
SFP1YLR403W IME2P32581 645 aa11.41□□□□□ -0.58
SFP1YLR403W IFH1P39520 1085 aa11.4□□□□□ -0.58
SFP1YLR403W HSP82P02829 709 aaKnown RBP11.36□□□□□ -0.59
SFP1YLR403W SNU71P53207 620 aaKnown RBP11.36□□□□□ -0.59
SFP1YLR403W PLP2Q12017 286 aa11.34□□□□□ -0.59
SFP1YLR403W FUN12P39730 1002 aaKnown RBP11.33□□□□□ -0.6
SFP1YLR403W YTA7P40340 1379 aa11.33□□□□□ -0.6
SFP1YLR403W SPC110P32380 944 aa11.32□□□□□ -0.6
SFP1YLR403W RIX1P38883 763 aaPredicted RBP11.32□□□□□ -0.6
SFP1YLR403W INO80P53115 1489 aa11.3□□□□□ -0.6
SFP1YLR403W STH1P32597 1359 aa11.3□□□□□ -0.6
SFP1YLR403W MDG1P53885 366 aa11.28□□□□□ -0.6
SFP1YLR403W RPN1P38764 993 aaKnown RBP11.27□□□□□ -0.61
SFP1YLR403W YNL011CP53980 444 aa11.27□□□□□ -0.61
SFP1YLR403W SSN2P38931 1420 aa11.26□□□□□ -0.61
SFP1YLR403W NMD2P38798 1089 aaKnown RBP11.26□□□□□ -0.61
SFP1YLR403W GRX3Q03835 250 aa11.25□□□□□ -0.61
SFP1YLR403W MTC1P47018 478 aaKnown RBP11.24□□□□□ -0.61
SFP1YLR403W TOP1P04786 769 aa11.23□□□□□ -0.61
SFP1YLR403W TIF4632P39936 914 aaKnown RBP11.22□□□□□ -0.61
SFP1YLR403W VPS4P52917 437 aa11.21□□□□□ -0.62
SFP1YLR403W PIL1P53252 339 aaKnown RBP11.21□□□□□ -0.62
SFP1YLR403W SAS10Q12136 610 aaPredicted RBP11.19□□□□□ -0.62
SFP1YLR403W PRS1P32895 427 aaKnown RBP11.18□□□□□ -0.62
SFP1YLR403W OPY1P38271 328 aa11.18□□□□□ -0.62
SFP1YLR403W ETT1Q08421 412 aaKnown RBP11.15□□□□□ -0.62
SFP1YLR403W EAF7P53911 425 aaKnown RBP11.13□□□□□ -0.63
SFP1YLR403W RPS0AP32905 252 aaKnown RBP11.1□□□□□ -0.63
SFP1YLR403W SWE1P32944 819 aa11.1□□□□□ -0.63
SFP1YLR403W HIF1Q12373 385 aa11.08□□□□□ -0.63
SFP1YLR403W PAF1P38351 445 aa11.08□□□□□ -0.64
SFP1YLR403W DOS2P54858 310 aa11.08□□□□□ -0.64
SFP1YLR403W TLG1Q03322 224 aa11.07□□□□□ -0.64
SFP1YLR403W SIC1P38634 284 aa11.05□□□□□ -0.64
SFP1YLR403W NNF2P53253 936 aa11.05□□□□□ -0.64
SFP1YLR403W MSH3P25336 1018 aa11.05□□□□□ -0.64
SFP1YLR403W RAD26P40352 1085 aa11.05□□□□□ -0.64
SFP1YLR403W NHA1Q99271 985 aa11.05□□□□□ -0.64
SFP1YLR403W CTR9P89105 1077 aa11.04□□□□□ -0.64
SFP1YLR403W SNF7P39929 240 aaKnown RBP11.04□□□□□ -0.64
SFP1YLR403W ORC1P54784 914 aaPredicted RBP11.04□□□□□ -0.64
SFP1YLR403W CFT1Q06632 1357 aaKnown RBP11.03□□□□□ -0.64
SFP1YLR403W SSA1P10591 642 aaKnown RBP11.03□□□□□ -0.64
SFP1YLR403W SSA2P10592 639 aaKnown RBP11.03□□□□□ -0.64
SFP1YLR403W MSH4P40965 878 aaPredicted RBP11.03□□□□□ -0.64
SFP1YLR403W TOA1P32773 286 aa11.02□□□□□ -0.65
SFP1YLR403W YSH1Q06224 779 aaPredicted RBP11.01□□□□□ -0.65
SFP1YLR403W ECM16Q04217 1267 aaKnown RBP11□□□□□ -0.65
SFP1YLR403W POL5P39985 1022 aaKnown RBP10.97□□□□□ -0.65
SFP1YLR403W SMC3P47037 1230 aa10.97□□□□□ -0.65
SFP1YLR403W ECM5Q03214 1411 aa10.96□□□□□ -0.65
SFP1YLR403W RPN7Q06103 429 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms