RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 MTC1P47018 478 aaKnown RBP25.26■■□□□ 1.63
VAR1Q0140 FAP1P53971 965 aa25.21■■□□□ 1.63
VAR1Q0140 PRY3P47033 881 aa23.79■■□□□ 1.4
VAR1Q0140 AAD16Q02895 342 aa22.65■■□□□ 1.22
VAR1Q0140 PRI1P10363 409 aa22.52■■□□□ 1.2
VAR1Q0140 YCK3P39962 524 aa22.44■■□□□ 1.18
VAR1Q0140 HAA1Q12753 694 aaKnown RBP22.14■■□□□ 1.13
VAR1Q0140 DRS1P32892 752 aaKnown RBP21.44■■□□□ 1.02
VAR1Q0140 ISW2Q08773 1120 aa21.39■■□□□ 1.01
VAR1Q0140 RPG1P38249 964 aaKnown RBP21.27■■□□□ 1
VAR1Q0140 TSR3Q12094 313 aaKnown RBP21.2■□□□□ 0.98
VAR1Q0140 MRPL32P25348 183 aa20.33■□□□□ 0.85
VAR1Q0140 YGL015CP33199 130 aa20.09■□□□□ 0.81
VAR1Q0140 DIP2Q12220 943 aaPredicted RBP19.57■□□□□ 0.72
VAR1Q0140 RSE1Q04693 1361 aaKnown RBP19.51■□□□□ 0.71
VAR1Q0140 BUD31P25337 157 aaPredicted RBP19.39■□□□□ 0.69
VAR1Q0140 REB1P21538 810 aa19.16■□□□□ 0.66
VAR1Q0140 RPL17AP05740 184 aaKnown RBP19.06■□□□□ 0.64
VAR1Q0140 RPL17BP46990 184 aaKnown RBP19.06■□□□□ 0.64
VAR1Q0140 CDC27P38042 758 aa18.99■□□□□ 0.63
VAR1Q0140 UBP10P53874 792 aaPredicted RBP18.66■□□□□ 0.58
VAR1Q0140 MAP2P38174 421 aaKnown RBP18.63■□□□□ 0.57
VAR1Q0140 YKR023WP36119 530 aaKnown RBP18.39■□□□□ 0.53
VAR1Q0140 SIS1P25294 352 aaKnown RBP18.25■□□□□ 0.51
VAR1Q0140 AVT3P36062 692 aa18.25■□□□□ 0.51
VAR1Q0140 SPT21P35209 758 aa18.09■□□□□ 0.49
VAR1Q0140 DCD1P06773 312 aa18.04■□□□□ 0.48
VAR1Q0140 HOP09932 586 aa18.03■□□□□ 0.48
VAR1Q0140 TFC8Q12308 588 aa18■□□□□ 0.47
VAR1Q0140 UBP9P39967 754 aa17.97■□□□□ 0.47
VAR1Q0140 TIF4632P39936 914 aaKnown RBP17.91■□□□□ 0.46
VAR1Q0140 TGL3P40308 642 aa17.86■□□□□ 0.45
VAR1Q0140 SCY1P53009 804 aa17.86■□□□□ 0.45
VAR1Q0140 SLX5P32828 619 aaKnown RBP17.73■□□□□ 0.43
VAR1Q0140 BCH2P36122 765 aa17.34■□□□□ 0.37
VAR1Q0140 YBL029C-AQ3E756 94 aa16.99■□□□□ 0.31
VAR1Q0140 RIM101P33400 625 aa16.95■□□□□ 0.3
VAR1Q0140 MST1P07236 462 aa16.87■□□□□ 0.29
VAR1Q0140 BFR2Q06631 534 aaKnown RBP16.77■□□□□ 0.28
VAR1Q0140 BDF1P35817 686 aa16.74■□□□□ 0.27
VAR1Q0140 EPS1P40557 701 aa16.74■□□□□ 0.27
VAR1Q0140 YOR238WQ08634 303 aa16.7■□□□□ 0.26
VAR1Q0140 VNX1P42839 908 aa16.68■□□□□ 0.26
VAR1Q0140 SPP1Q03012 353 aa16.52■□□□□ 0.24
VAR1Q0140 NSR1P27476 414 aaKnown RBP RIP-Chip data16.42■□□□□ 0.22not detected
VAR1Q0140 AIR2Q12476 344 aaKnown RBP16.42■□□□□ 0.22
VAR1Q0140 WSC3Q12215 556 aa16.4■□□□□ 0.22
VAR1Q0140 OXP1P28273 1286 aa16.35■□□□□ 0.21
VAR1Q0140 YJL171CP46992 396 aa16.35■□□□□ 0.21
VAR1Q0140 FKH1P40466 484 aa16.3■□□□□ 0.2
VAR1Q0140 YAP5P40574 245 aa16.28■□□□□ 0.2
VAR1Q0140 TIF11P38912 153 aaKnown RBP16.2■□□□□ 0.18
VAR1Q0140 PTP3P40048 928 aa16.17■□□□□ 0.18
VAR1Q0140 YIL055CP40523 627 aaKnown RBP16.06■□□□□ 0.16
VAR1Q0140 BBC1P47068 1157 aa16.02■□□□□ 0.16
VAR1Q0140 LDB19Q12502 818 aa16■□□□□ 0.15
VAR1Q0140 GTT3P39996 337 aa15.99■□□□□ 0.15
VAR1Q0140 BMT6Q12291 365 aa15.96■□□□□ 0.15
VAR1Q0140 AI2P03876 854 aa15.89■□□□□ 0.13
VAR1Q0140 ULI1P43604 169 aa15.88■□□□□ 0.13
VAR1Q0140 IOC2Q12072 812 aa15.88■□□□□ 0.13
VAR1Q0140 RSM7P47150 247 aa15.85■□□□□ 0.13
VAR1Q0140 PIB1Q06651 286 aa15.68■□□□□ 0.1
VAR1Q0140 YAH1Q12184 172 aaKnown RBP15.57■□□□□ 0.08
VAR1Q0140 MSB4Q12317 492 aa15.51■□□□□ 0.07
VAR1Q0140 RTG1P32607 177 aa15.5■□□□□ 0.07
VAR1Q0140 EAP1P36041 632 aaKnown RBP15.47■□□□□ 0.07
VAR1Q0140 NCR1Q12200 1170 aa15.44■□□□□ 0.06
VAR1Q0140 TRP5P00931 707 aaKnown RBP15.38■□□□□ 0.05
VAR1Q0140 SET4P42948 560 aa15.36■□□□□ 0.05
VAR1Q0140 YOL036WQ08206 761 aa15.35■□□□□ 0.05
VAR1Q0140 YNL035CP53962 389 aaKnown RBP15.27■□□□□ 0.04
VAR1Q0140 SEC61P32915 480 aa15.26■□□□□ 0.03
VAR1Q0140 MRM1P25270 412 aa15.22■□□□□ 0.03
VAR1Q0140 PSD2P53037 1138 aaKnown RBP15.22■□□□□ 0.03
VAR1Q0140 YLR271WQ06152 274 aa15.21■□□□□ 0.03
VAR1Q0140 BCK2P33306 851 aa15.13■□□□□ 0.01
VAR1Q0140 TFG1P41895 735 aaPredicted RBP15.06■□□□□ 0
VAR1Q0140 SAP30P38429 201 aa15.05■□□□□ -0
VAR1Q0140 DBP1P24784 617 aaKnown RBP15□□□□□ -0.01
VAR1Q0140 YMR1P47147 688 aaKnown RBP RIP-Chip data14.99□□□□□ -0.01not detected
VAR1Q0140 VMA1P17255 1071 aaKnown RBP14.97□□□□□ -0.01
VAR1Q0140 YFR006WP43590 535 aa14.96□□□□□ -0.01
VAR1Q0140 CHL1P22516 861 aaPredicted RBP14.95□□□□□ -0.02
VAR1Q0140 SAM3Q08986 587 aa14.94□□□□□ -0.02
VAR1Q0140 DAN4P47179 1161 aa14.93□□□□□ -0.02
VAR1Q0140 VPS29P38759 282 aa14.92□□□□□ -0.02
VAR1Q0140 YDL129WQ07555 291 aa14.87□□□□□ -0.03
VAR1Q0140 PRE3P38624 215 aa14.85□□□□□ -0.03
VAR1Q0140 STS1P38637 319 aa14.84□□□□□ -0.03
VAR1Q0140 JIP4Q03361 876 aa14.83□□□□□ -0.04
VAR1Q0140 RTG3P38165 486 aa14.71□□□□□ -0.05
VAR1Q0140 ABP1P15891 592 aaKnown RBP14.64□□□□□ -0.07
VAR1Q0140 XDJ1P39102 459 aa14.64□□□□□ -0.07
VAR1Q0140 GYP5Q12344 894 aa14.64□□□□□ -0.07
VAR1Q0140 VRP1P37370 817 aa14.62□□□□□ -0.07
VAR1Q0140 HTA1P04911 132 aaKnown RBP14.6□□□□□ -0.07
VAR1Q0140 HTA2P04912 132 aa14.6□□□□□ -0.07
VAR1Q0140 PTC4P38089 393 aa14.59□□□□□ -0.07
VAR1Q0140 CST9Q06032 482 aa14.58□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms