RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 DDX3XO00571 662 aaKnown RBP eCLIP14.66□□□□□ -0.061e-28■■■■■ 35.7
TARDBP-231ENST00000639599 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.257e-26■■■□□ 18.2
TARDBP-231ENST00000639599 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.723e-23■□□□□ 9.1
TARDBP-231ENST00000639599 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.17□□□□□ -0.32e-21■■□□□ 12.4
TARDBP-231ENST00000639599 PRPF4O43172 522 aaKnown RBP eCLIP14.07□□□□□ -0.162e-14■■□□□ 12.4
TARDBP-231ENST00000639599 TARDBPQ13148 414 aaKnown RBP eCLIP15.03■□□□□ -01e-13■■■■■ 26.9
TARDBP-231ENST00000639599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.29■□□□□ 0.523e-13■□□□□ 8.3
TARDBP-231ENST00000639599 ZRANB2O95218 330 aaKnown RBP eCLIP14.38□□□□□ -0.115e-13■□□□□ 10.2
TARDBP-231ENST00000639599 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.798e-13■□□□□ 8.1
TARDBP-231ENST00000639599 NCBP2P52298 156 aaKnown RBP eCLIP13.32□□□□□ -0.281e-12■■■□□ 17.9
TARDBP-231ENST00000639599 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.442e-12■□□□□ 8.7
TARDBP-231ENST00000639599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.87■□□□□ 0.298e-12■■■■■ 35.2
TARDBP-231ENST00000639599 GRSF1Q12849 480 aaKnown RBP eCLIP15.81■□□□□ 0.121e-11■■□□□ 12.1
TARDBP-231ENST00000639599 SUB1P53999 127 aaKnown RBP eCLIP10.85□□□□□ -0.671e-11■□□□□ 9.4
TARDBP-231ENST00000639599 UPF1Q92900 1129 aaKnown RBP eCLIP21.68■■□□□ 1.062e-11■■■□□ 15.1
TARDBP-231ENST00000639599 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.838e-11■■□□□ 12.1
TARDBP-231ENST00000639599 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.162e-10■□□□□ 10.5
TARDBP-231ENST00000639599 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.592e-10■■■□□ 18.4
TARDBP-231ENST00000639599 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.813e-10■■□□□ 12.1
TARDBP-231ENST00000639599 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.251e-9■□□□□ 11
TARDBP-231ENST00000639599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.85■■□□□ 1.252e-9■■□□□ 13.4
TARDBP-231ENST00000639599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.412e-9■■■■■ 39
TARDBP-231ENST00000639599 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.353e-9■■□□□ 11.9
TARDBP-231ENST00000639599 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.495e-9■□□□□ 10.1
TARDBP-231ENST00000639599 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.272e-8■■■■■ 29.2
TARDBP-231ENST00000639599 SRSF1Q07955 248 aaKnown RBP eCLIP14.29□□□□□ -0.123e-8■■□□□ 11.4
TARDBP-231ENST00000639599 RPS3P23396 243 aaKnown RBP eCLIP14.05□□□□□ -0.163e-8■□□□□ 11
TARDBP-231ENST00000639599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.72□□□□□ -0.215e-8■■■■■ 204.6
TARDBP-231ENST00000639599 DDX6P26196 483 aaKnown RBP eCLIP15.83■□□□□ 0.121e-7■■■■□ 21
TARDBP-231ENST00000639599 ZC3H11AO75152 810 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■□□□ 12
TARDBP-231ENST00000639599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■■■□ 22.4
TARDBP-231ENST00000639599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.08■■□□□ 1.451e-7■■■■■ 34.9
TARDBP-231ENST00000639599 RBM22Q9NW64 420 aaKnown RBP eCLIP14.62□□□□□ -0.071e-7■■■■□ 22.6
TARDBP-231ENST00000639599 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.182e-7■■□□□ 11.5
TARDBP-231ENST00000639599 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.842e-7■■□□□ 14.3
TARDBP-231ENST00000639599 TIA1P31483 386 aaKnown RBP eCLIP13.32□□□□□ -0.282e-7■■■□□ 17.4
TARDBP-231ENST00000639599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.813e-7■■□□□ 13.6
TARDBP-231ENST00000639599 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.733e-7■■■□□ 15.3
TARDBP-231ENST00000639599 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.244e-7■□□□□ 10.8
TARDBP-231ENST00000639599 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.776e-7■□□□□ 11.3
TARDBP-231ENST00000639599 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.216e-7■■□□□ 11.7
TARDBP-231ENST00000639599 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■□□□□ 8.8
TARDBP-231ENST00000639599 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.367e-7■■□□□ 12.4
TARDBP-231ENST00000639599 RBM15Q96T37 977 aaKnown RBP eCLIP14.76□□□□□ -0.059e-7■■■□□ 18.3
TARDBP-231ENST00000639599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.55□□□□□ -0.081e-6■□□□□ 9.2
TARDBP-231ENST00000639599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.261e-6■■■□□ 15.4
TARDBP-231ENST00000639599 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■□□□□ 10.9
TARDBP-231ENST00000639599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.92□□□□□ -0.183e-6■■■■□ 22.6
TARDBP-231ENST00000639599 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.215e-6■■□□□ 12.3
TARDBP-231ENST00000639599 ILF3Q12906 894 aaKnown RBP eCLIP14.74□□□□□ -0.056e-6■□□□□ 8.6
TARDBP-231ENST00000639599 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.27□□□□□ -0.137e-6■■■■■ 27.5
Retrieved 51 of 51 RNA–protein pairs in 29.3 ms