RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.433e-30■■■■■ 33.2
TARDBP-229ENST00000638264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.53□□□□□ -0.41e-28■■■■■ 32.6
TARDBP-229ENST00000638264 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.477e-26■■■□□ 18.2
TARDBP-229ENST00000638264 ZNF622Q969S3 477 aaKnown RBP eCLIP14.32□□□□□ -0.123e-23■□□□□ 9.1
TARDBP-229ENST00000638264 PRPF4O43172 522 aaKnown RBP eCLIP11.46□□□□□ -0.572e-14■■□□□ 12.4
TARDBP-229ENST00000638264 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.475e-13■□□□□ 10.2
TARDBP-229ENST00000638264 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.13□□□□□ -0.152e-12■□□□□ 8.7
TARDBP-229ENST00000638264 NCBP2P52298 156 aaKnown RBP eCLIP10.94□□□□□ -0.669e-12■□□□□ 8.6
TARDBP-229ENST00000638264 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.411e-11■■□□□ 11.7
TARDBP-229ENST00000638264 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.022e-11■■■□□ 15.1
TARDBP-229ENST00000638264 CDC40O60508 579 aaKnown RBP eCLIP10.62□□□□□ -0.715e-11■□□□□ 8.5
TARDBP-229ENST00000638264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.6□□□□□ -0.392e-10■□□□□ 9.1
TARDBP-229ENST00000638264 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.273e-10■□□□□ 10
TARDBP-229ENST00000638264 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.451e-9■□□□□ 10.4
TARDBP-229ENST00000638264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.332e-9■■□□□ 13.4
TARDBP-229ENST00000638264 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.15e-9■□□□□ 10.1
TARDBP-229ENST00000638264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.49□□□□□ -0.895e-9■■■■■ 42.5
TARDBP-229ENST00000638264 DDX6P26196 483 aaKnown RBP eCLIP12.18□□□□□ -0.461e-8■□□□□ 10.3
TARDBP-229ENST00000638264 TIA1P31483 386 aaKnown RBP eCLIP11.09□□□□□ -0.631e-8■■□□□ 14.3
TARDBP-229ENST00000638264 SMNDC1O75940 238 aaKnown RBP eCLIP10.25□□□□□ -0.772e-8■■■■■ 29.2
TARDBP-229ENST00000638264 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.84e-8■□□□□ 11.3
TARDBP-229ENST00000638264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.14□□□□□ -0.635e-8■■■■■ 204.6
TARDBP-229ENST00000638264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■□ 22.4
TARDBP-229ENST00000638264 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■□□□ 11.5
TARDBP-229ENST00000638264 RBM22Q9NW64 420 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■■ 31.6
TARDBP-229ENST00000638264 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.662e-7■■□□□ 14.3
TARDBP-229ENST00000638264 SF3B4Q15427 424 aaKnown RBP eCLIP10.5□□□□□ -0.732e-7■□□□□ 10.4
TARDBP-229ENST00000638264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.053e-7■■□□□ 13.6
TARDBP-229ENST00000638264 U2AF1Q01081 240 aaKnown RBP eCLIP15.5■□□□□ 0.073e-7■■■□□ 15.3
TARDBP-229ENST00000638264 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.396e-7■□□□□ 8.8
TARDBP-229ENST00000638264 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■□□□ 12.6
TARDBP-229ENST00000638264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.713e-6■■■■□ 22.6
TARDBP-229ENST00000638264 ILF3Q12906 894 aaKnown RBP eCLIP11.43□□□□□ -0.586e-6■□□□□ 8.6
TARDBP-229ENST00000638264 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.64□□□□□ -0.557e-6■■■■■ 27.5
Retrieved 34 of 34 RNA–protein pairs in 28.4 ms