RNA: ENST00000628795.2

GREB1-210, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-210ENST00000628795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.25□□□□□ -1.575e-16■■■■■ 508.8
GREB1-210ENST00000628795 PABPC4Q13310 644 aaKnown RBP eCLIP5.2□□□□□ -1.589e-16■■■■■ 136.4
GREB1-210ENST00000628795 NPM1P06748 294 aaKnown RBP eCLIP6.27□□□□□ -1.413e-9■■■■■ 56
GREB1-210ENST00000628795 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.41□□□□□ -1.549e-9■■■■■ 52.4
GREB1-210ENST00000628795 WRNQ14191 1432 aaPredicted RBP eCLIP6.97□□□□□ -1.297e-6■■■■■ 48.1
GREB1-210ENST00000628795 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.62□□□□□ -1.672e-7■■■■■ 47.9
GREB1-210ENST00000628795 U2AF1Q01081 240 aaKnown RBP eCLIP5.65□□□□□ -1.53e-13■■■■■ 45
GREB1-210ENST00000628795 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.82□□□□□ -1.649e-7■■■■■ 42.3
GREB1-210ENST00000628795 GPKOWQ92917 476 aaPredicted RBP eCLIP4.99□□□□□ -1.614e-7■■■■■ 40.8
GREB1-210ENST00000628795 DDX3XO00571 662 aaKnown RBP eCLIP5.12□□□□□ -1.593e-9■■■■■ 39.9
GREB1-210ENST00000628795 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.633e-8■■■■■ 39.1
GREB1-210ENST00000628795 PCBP2Q15366 365 aaKnown RBP eCLIP4.58□□□□□ -1.687e-7■■■■■ 38.2
GREB1-210ENST00000628795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.82□□□□□ -1.646e-17■■■■■ 35.1
GREB1-210ENST00000628795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.35□□□□□ -1.551e-8■■■■■ 34.6
GREB1-210ENST00000628795 GRSF1Q12849 480 aaKnown RBP eCLIP4.95□□□□□ -1.627e-10■■■■■ 34.2
GREB1-210ENST00000628795 SMNDC1O75940 238 aaKnown RBP eCLIP5.35□□□□□ -1.555e-9■■■■■ 32.9
GREB1-210ENST00000628795 NSUN2Q08J23 767 aaKnown RBP eCLIP4.95□□□□□ -1.622e-7■■■■■ 32.1
GREB1-210ENST00000628795 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.757e-9■■■■■ 29.9
GREB1-210ENST00000628795 DKC1O60832 514 aaKnown RBP eCLIP5.04□□□□□ -1.63e-7■■■■■ 28.6
GREB1-210ENST00000628795 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.79e-10■■■■■ 27.5
GREB1-210ENST00000628795 AQRO60306 1485 aaKnown RBP eCLIP6.19□□□□□ -1.428e-7■■■■□ 24.4
GREB1-210ENST00000628795 RBM22Q9NW64 420 aaKnown RBP eCLIP4.57□□□□□ -1.682e-7■■■■□ 23.6
GREB1-210ENST00000628795 TRA2AQ13595 282 aaKnown RBP eCLIP4.23□□□□□ -1.732e-6■■■■□ 22.4
GREB1-210ENST00000628795 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.85□□□□□ -1.632e-7■■■■□ 22.3
GREB1-210ENST00000628795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.12□□□□□ -1.598e-6■■■■□ 22
GREB1-210ENST00000628795 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.74□□□□□ -1.651e-8■■■■□ 20.6
GREB1-210ENST00000628795 AGGF1Q8N302 714 aaeCLIP5.23□□□□□ -1.572e-8■■■□□ 18.9
GREB1-210ENST00000628795 NCBP2P52298 156 aaKnown RBP eCLIP4.31□□□□□ -1.721e-7■■■□□ 18.7
GREB1-210ENST00000628795 HNRNPMP52272 730 aaKnown RBP eCLIP5.62□□□□□ -1.511e-6■■■□□ 18.5
GREB1-210ENST00000628795 CSTF2P33240 577 aaKnown RBP eCLIP4.76□□□□□ -1.655e-6■■■□□ 18.3
GREB1-210ENST00000628795 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.594e-7■■■□□ 18.2
GREB1-210ENST00000628795 PTBP1P26599 531 aaKnown RBP eCLIP4.68□□□□□ -1.665e-7■■■□□ 18.2
GREB1-210ENST00000628795 SF3A3Q12874 501 aaKnown RBP eCLIP5.11□□□□□ -1.597e-7■■■□□ 18.1
GREB1-210ENST00000628795 EFTUD2Q15029 972 aaKnown RBP eCLIP4.93□□□□□ -1.621e-8■■■□□ 17.6
GREB1-210ENST00000628795 GTF2F1P35269 517 aaKnown RBP eCLIP5.94□□□□□ -1.461e-7■■■□□ 17.2
GREB1-210ENST00000628795 HNRNPLP14866 589 aaKnown RBP eCLIP4.7□□□□□ -1.668e-10■■■□□ 16.6
GREB1-210ENST00000628795 MATR3P43243 847 aaKnown RBP eCLIP5.25□□□□□ -1.579e-7■■■□□ 16.2
GREB1-210ENST00000628795 TIAL1Q01085 375 aaKnown RBP eCLIP4.58□□□□□ -1.683e-8■■■□□ 15.9
GREB1-210ENST00000628795 RBM15Q96T37 977 aaKnown RBP eCLIP5□□□□□ -1.619e-7■■■□□ 15.8
GREB1-210ENST00000628795 RBFOX2O43251 390 aaKnown RBP eCLIP4.09□□□□□ -1.753e-7■■■□□ 15.7
GREB1-210ENST00000628795 NKRFO15226 690 aaKnown RBP eCLIP5.04□□□□□ -1.61e-6■■■□□ 15
GREB1-210ENST00000628795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.5□□□□□ -1.532e-7■■■□□ 15
GREB1-210ENST00000628795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.29□□□□□ -1.565e-18■■■□□ 14.8
GREB1-210ENST00000628795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.27□□□□□ -1.578e-6■■■□□ 14.7
GREB1-210ENST00000628795 ILF3Q12906 894 aaKnown RBP eCLIP4.5□□□□□ -1.693e-6■■□□□ 14.5
GREB1-210ENST00000628795 RPS3P23396 243 aaKnown RBP eCLIP4.67□□□□□ -1.665e-7■■□□□ 14.2
GREB1-210ENST00000628795 PPIGQ13427 754 aaKnown RBP eCLIP4.57□□□□□ -1.684e-24■■□□□ 13.9
GREB1-210ENST00000628795 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.96□□□□□ -1.622e-7■■□□□ 13.9
GREB1-210ENST00000628795 SFPQP23246 707 aaKnown RBP eCLIP5.55□□□□□ -1.521e-6■■□□□ 13.8
GREB1-210ENST00000628795 CDC40O60508 579 aaKnown RBP eCLIP4.36□□□□□ -1.712e-9■■□□□ 13.6
GREB1-210ENST00000628795 FUSP35637 526 aaKnown RBP eCLIP3.37□□□□□ -1.872e-6■■□□□ 13.3
GREB1-210ENST00000628795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.13□□□□□ -1.913e-7■■□□□ 13
GREB1-210ENST00000628795 HNRNPKP61978 463 aaKnown RBP eCLIP4.38□□□□□ -1.715e-6■■□□□ 11.6
GREB1-210ENST00000628795 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.19□□□□□ -1.587e-15■□□□□ 11.3
GREB1-210ENST00000628795 QKIQ96PU8 341 aaKnown RBP eCLIP4.76□□□□□ -1.651e-12■□□□□ 11.3
GREB1-210ENST00000628795 SF3B4Q15427 424 aaKnown RBP eCLIP4.91□□□□□ -1.623e-8■□□□□ 11.2
GREB1-210ENST00000628795 HNRNPUQ00839 825 aaKnown RBP eCLIP6.49□□□□□ -1.372e-8■□□□□ 10.9
GREB1-210ENST00000628795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.62□□□□□ -1.512e-7■□□□□ 9.7
GREB1-210ENST00000628795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.97□□□□□ -1.133e-13■□□□□ 9.6
GREB1-210ENST00000628795 KHSRPQ92945 711 aaKnown RBP eCLIP5.38□□□□□ -1.553e-7■□□□□ 8.7
GREB1-210ENST00000628795 ZNF622Q969S3 477 aaKnown RBP eCLIP5.75□□□□□ -1.492e-7■□□□□ 8.6
Retrieved 61 of 61 RNA–protein pairs in 42.1 ms