RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.02■□□□□ -01e-18■■■■■ 114.6
PDCD6-214ENST00000628729 SF3B1O75533 1304 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■■■ 103.4
PDCD6-214ENST00000628729 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.16■□□□□ 0.52e-10■■■■■ 60.9
PDCD6-214ENST00000628729 QKIQ96PU8 341 aaKnown RBP eCLIP16.29■□□□□ 0.22e-16■■■■■ 59
PDCD6-214ENST00000628729 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.356e-8■■■■■ 55.7
PDCD6-214ENST00000628729 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.95■□□□□ 0.142e-6■■■■■ 54.9
PDCD6-214ENST00000628729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.49e-7■■■■■ 53.5
PDCD6-214ENST00000628729 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■■■■■ 48.1
PDCD6-214ENST00000628729 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.481e-9■■■■■ 46.9
PDCD6-214ENST00000628729 PCBP1Q15365 356 aaKnown RBP eCLIP18.4■□□□□ 0.546e-8■■■■■ 46.6
PDCD6-214ENST00000628729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■■■ 43.8
PDCD6-214ENST00000628729 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.262e-7■■■■■ 43.7
PDCD6-214ENST00000628729 PCBP2Q15366 365 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■■■■■ 40.7
PDCD6-214ENST00000628729 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.19■□□□□ 0.186e-12■■■■■ 40.3
PDCD6-214ENST00000628729 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■■■■■ 38.7
PDCD6-214ENST00000628729 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.38■□□□□ 0.692e-10■■■■■ 38.3
PDCD6-214ENST00000628729 HNRNPMP52272 730 aaKnown RBP eCLIP26.73■■□□□ 1.872e-7■■■■■ 37.9
PDCD6-214ENST00000628729 DKC1O60832 514 aaKnown RBP eCLIP18.5■□□□□ 0.551e-7■■■■■ 36.5
PDCD6-214ENST00000628729 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.355e-6■■■■■ 33.4
PDCD6-214ENST00000628729 PRPF4O43172 522 aaKnown RBP eCLIP15.69■□□□□ 0.11e-8■■■■■ 33.2
PDCD6-214ENST00000628729 YWHAGP61981 247 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■■■■■ 27.7
PDCD6-214ENST00000628729 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.225e-7■■■■■ 27.5
PDCD6-214ENST00000628729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.012e-6■■■■■ 26.8
PDCD6-214ENST00000628729 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.09■□□□□ 0.338e-8■■■■□ 26.5
PDCD6-214ENST00000628729 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.265e-13■■■■□ 26.2
PDCD6-214ENST00000628729 EFTUD2Q15029 972 aaKnown RBP eCLIP15.4■□□□□ 0.065e-7■■■■□ 26.2
PDCD6-214ENST00000628729 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.36□□□□□ -0.113e-9■■■■□ 25.3
PDCD6-214ENST00000628729 AQRO60306 1485 aaKnown RBP eCLIP30.3■■■□□ 2.441e-6■■■■□ 25.2
PDCD6-214ENST00000628729 SF3A3Q12874 501 aaKnown RBP eCLIP14.15□□□□□ -0.144e-8■■■■□ 23.8
PDCD6-214ENST00000628729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.7■□□□□ 0.91e-6■■■■□ 23.4
PDCD6-214ENST00000628729 HNRNPKP61978 463 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■■■□ 23.3
PDCD6-214ENST00000628729 HLTFQ14527 1009 aaKnown RBP eCLIP16.58■□□□□ 0.242e-11■■■■□ 23.2
PDCD6-214ENST00000628729 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.387e-7■■■■□ 23
PDCD6-214ENST00000628729 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■■□ 22.8
PDCD6-214ENST00000628729 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.64e-8■■■■□ 22.3
PDCD6-214ENST00000628729 LSM11P83369 360 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■■□ 22.2
PDCD6-214ENST00000628729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.75■□□□□ 0.754e-6■■■■□ 21.8
PDCD6-214ENST00000628729 ZC3H11AO75152 810 aaKnown RBP eCLIP18.53■□□□□ 0.562e-12■■■■□ 21.5
PDCD6-214ENST00000628729 AATFQ9NY61 560 aaKnown RBP eCLIP20.35■□□□□ 0.858e-6■■■■□ 21.3
PDCD6-214ENST00000628729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.739e-7■■■■□ 21.2
PDCD6-214ENST00000628729 RBFOX2O43251 390 aaKnown RBP eCLIP12.42□□□□□ -0.422e-7■■■■□ 21.1
PDCD6-214ENST00000628729 SMNDC1O75940 238 aaKnown RBP eCLIP14.91□□□□□ -0.028e-9■■■■□ 21
PDCD6-214ENST00000628729 RPS3P23396 243 aaKnown RBP eCLIP15.88■□□□□ 0.138e-10■■■■□ 20.7
PDCD6-214ENST00000628729 NONOQ15233 471 aaKnown RBP eCLIP18.65■□□□□ 0.587e-7■■■□□ 18.8
PDCD6-214ENST00000628729 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.61e-6■■■□□ 18.7
PDCD6-214ENST00000628729 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.62■□□□□ 0.092e-6■■■□□ 17.8
PDCD6-214ENST00000628729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.25■□□□□ 0.513e-8■■■□□ 17.7
PDCD6-214ENST00000628729 ZRANB2O95218 330 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■□□ 16.1
PDCD6-214ENST00000628729 TARDBPQ13148 414 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■□□ 15.8
PDCD6-214ENST00000628729 SF3B4Q15427 424 aaKnown RBP eCLIP15□□□□□ -0.013e-7■■■□□ 15.5
PDCD6-214ENST00000628729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.71■□□□□ 0.753e-7■■■□□ 15.3
PDCD6-214ENST00000628729 HNRNPLP14866 589 aaKnown RBP eCLIP17.58■□□□□ 0.43e-8■■■□□ 15.1
PDCD6-214ENST00000628729 XRCC6P12956 609 aaKnown RBP eCLIP18.36■□□□□ 0.531e-5■■■□□ 14.9
PDCD6-214ENST00000628729 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.276e-6■■□□□ 14.4
PDCD6-214ENST00000628729 ZNF622Q969S3 477 aaKnown RBP eCLIP21.98■■□□□ 1.111e-6■■□□□ 14.2
PDCD6-214ENST00000628729 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■□□□ 14
PDCD6-214ENST00000628729 SAFB2Q14151 953 aaKnown RBP eCLIP24.43■■□□□ 1.53e-8■■□□□ 13.6
PDCD6-214ENST00000628729 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.237e-7■■□□□ 13.2
PDCD6-214ENST00000628729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.642e-9■■□□□ 12.3
PDCD6-214ENST00000628729 PABPC4Q13310 644 aaKnown RBP eCLIP20.16■□□□□ 0.821e-7■■□□□ 12.2
PDCD6-214ENST00000628729 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.255e-7■■□□□ 11.4
PDCD6-214ENST00000628729 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.47■□□□□ 0.711e-6■□□□□ 11.2
PDCD6-214ENST00000628729 NIPBLQ6KC79 2804 aaeCLIP15.02■□□□□ -07e-6■□□□□ 10.5
PDCD6-214ENST00000628729 NOLC1Q14978 699 aaKnown RBP eCLIP18.13■□□□□ 0.496e-11■□□□□ 10
PDCD6-214ENST00000628729 DDX6P26196 483 aaKnown RBP eCLIP17.75■□□□□ 0.434e-11■□□□□ 9.8
PDCD6-214ENST00000628729 MATR3P43243 847 aaKnown RBP eCLIP18.04■□□□□ 0.483e-6■□□□□ 9.6
PDCD6-214ENST00000628729 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.221e-8■□□□□ 8.4
Retrieved 67 of 67 RNA–protein pairs in 41.6 ms