RNA: ENST00000620902.1

MALAT1-217, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 352 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-217ENST00000620902 SAFB2Q14151 953 aaKnown RBP eCLIP12.19□□□□□ -0.46not detected■□□□□ 9.1
MALAT1-217ENST00000620902 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.49not detected■□□□□ 9.5
MALAT1-217ENST00000620902 CPSF6Q16630 551 aaKnown RBP eCLIP11.62□□□□□ -0.55not detected■□□□□ 10.6
MALAT1-217ENST00000620902 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.56not detected■■□□□ 13.7
MALAT1-217ENST00000620902 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.51□□□□□ -0.73not detected■■■□□ 18.1
MALAT1-217ENST00000620902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.99□□□□□ -0.81not detected■□□□□ 10.8
MALAT1-217ENST00000620902 TRA2AQ13595 282 aaKnown RBP eCLIP8.01□□□□□ -1.13not detected■■■■■ 70.4
MALAT1-217ENST00000620902 RBM22Q9NW64 420 aaKnown RBP eCLIP6.85□□□□□ -1.31not detected■■□□□ 14.4
MALAT1-217ENST00000620902 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.67□□□□□ -1.34not detected■■□□□ 11.9
MALAT1-217ENST00000620902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.1□□□□□ -1.43not detected■■■□□ 15
MALAT1-217ENST00000620902 SRSF9Q13242 221 aaKnown RBP eCLIP5.21□□□□□ -1.58not detected■■■■■ 34.7
MALAT1-217ENST00000620902 GTF2F1P35269 517 aaKnown RBP eCLIP10.11□□□□□ -0.79not detected■■□□□ 12.3
MALAT1-217ENST00000620902 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.31□□□□□ -1.24not detected■□□□□ 8.6
MALAT1-217ENST00000620902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56not detected■■□□□ 11.5
MALAT1-217ENST00000620902 NCBP2P52298 156 aaKnown RBP eCLIP6.01□□□□□ -1.45not detected■■□□□ 14
MALAT1-217ENST00000620902 SAFBQ15424 915 aaKnown RBP eCLIP8.26□□□□□ -1.09not detected■■□□□ 13.2
MALAT1-217ENST00000620902 SRSF1Q07955 248 aaKnown RBP eCLIP9.82□□□□□ -0.84not detected■■■■■ 30.9
MALAT1-217ENST00000620902 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5not detected■□□□□ 8.2
MALAT1-217ENST00000620902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.1□□□□□ -1.11not detected■■□□□ 13.8
MALAT1-217ENST00000620902 HNRNPA1P09651 372 aaKnown RBP eCLIP9.02□□□□□ -0.97not detected■■□□□ 11.8
Retrieved 20 of 20 RNA–protein pairs in 18.3 ms