RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.28□□□□□ -0.765e-8■■■■■ 204.6
TARDBP-223ENST00000620632 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.11□□□□□ -0.958e-12■■■■■ 45.2
TARDBP-223ENST00000620632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.488e-12■■■■■ 35.2
TARDBP-223ENST00000620632 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■■■■■ 29.2
TARDBP-223ENST00000620632 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.58□□□□□ -0.727e-6■■■■■ 27.5
TARDBP-223ENST00000620632 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.721e-13■■■■■ 26.9
TARDBP-223ENST00000620632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.6□□□□□ -0.551e-9■■■■□ 21.2
TARDBP-223ENST00000620632 RBM22Q9NW64 420 aaKnown RBP eCLIP10.91□□□□□ -0.661e-7■■■■□ 20.3
TARDBP-223ENST00000620632 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.77□□□□□ -0.853e-6■■■■□ 20.3
TARDBP-223ENST00000620632 SRSF7Q16629 238 aaKnown RBP eCLIP8.63□□□□□ -1.032e-10■■■□□ 18.4
TARDBP-223ENST00000620632 GTF2F1P35269 517 aaKnown RBP eCLIP11.75□□□□□ -0.537e-26■■■□□ 18.2
TARDBP-223ENST00000620632 TIA1P31483 386 aaKnown RBP eCLIP10.09□□□□□ -0.792e-7■■■□□ 17.4
TARDBP-223ENST00000620632 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.093e-7■■■□□ 15.3
TARDBP-223ENST00000620632 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.062e-11■■■□□ 15.1
TARDBP-223ENST00000620632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.097e-10■■□□□ 14.4
TARDBP-223ENST00000620632 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.595e-11■■□□□ 14.4
TARDBP-223ENST00000620632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.212e-9■■□□□ 12.6
TARDBP-223ENST00000620632 PRPF4O43172 522 aaKnown RBP eCLIP10.19□□□□□ -0.782e-14■■□□□ 12.4
TARDBP-223ENST00000620632 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.07□□□□□ -0.82e-21■■□□□ 12.4
TARDBP-223ENST00000620632 CDC40O60508 579 aaKnown RBP eCLIP9.85□□□□□ -0.835e-6■■□□□ 12.3
TARDBP-223ENST00000620632 GRSF1Q12849 480 aaKnown RBP eCLIP11.19□□□□□ -0.621e-11■■□□□ 12.1
TARDBP-223ENST00000620632 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.028e-11■■□□□ 12.1
TARDBP-223ENST00000620632 FUSP35637 526 aaKnown RBP eCLIP7.19□□□□□ -1.263e-10■■□□□ 12.1
TARDBP-223ENST00000620632 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■□□□ 12
TARDBP-223ENST00000620632 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.873e-9■■□□□ 11.9
TARDBP-223ENST00000620632 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.471e-11■■□□□ 11.7
TARDBP-223ENST00000620632 TIAL1Q01085 375 aaKnown RBP eCLIP10.53□□□□□ -0.726e-7■■□□□ 11.7
TARDBP-223ENST00000620632 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.472e-7■■□□□ 11.5
TARDBP-223ENST00000620632 SF3B4Q15427 424 aaKnown RBP eCLIP9.66□□□□□ -0.864e-7■■□□□ 11.4
TARDBP-223ENST00000620632 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.833e-8■■□□□ 11.4
TARDBP-223ENST00000620632 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.571e-9■□□□□ 10.4
TARDBP-223ENST00000620632 ZRANB2O95218 330 aaKnown RBP eCLIP10.94□□□□□ -0.665e-13■□□□□ 10.2
TARDBP-223ENST00000620632 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.453e-10■□□□□ 10
TARDBP-223ENST00000620632 DDX6P26196 483 aaKnown RBP eCLIP11.38□□□□□ -0.595e-34■□□□□ 10
TARDBP-223ENST00000620632 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.11e-11■□□□□ 9.4
TARDBP-223ENST00000620632 PPIGQ13427 754 aaKnown RBP eCLIP12.1□□□□□ -0.474e-11■□□□□ 9.2
TARDBP-223ENST00000620632 ZNF622Q969S3 477 aaKnown RBP eCLIP13.78□□□□□ -0.23e-23■□□□□ 9.1
TARDBP-223ENST00000620632 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.322e-12■□□□□ 8.7
TARDBP-223ENST00000620632 ILF3Q12906 894 aaKnown RBP eCLIP10.65□□□□□ -0.76e-6■□□□□ 8.6
TARDBP-223ENST00000620632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.323e-13■□□□□ 8.3
TARDBP-223ENST00000620632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.611e-11■□□□□ 8.2
TARDBP-223ENST00000620632 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.198e-13■□□□□ 8.1
Retrieved 42 of 42 RNA–protein pairs in 29.7 ms