RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
TARDBP-223ENST00000620632 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
TARDBP-223ENST00000620632 ABCC9O60706 1549 aa22.72■■□□□ 1.23
TARDBP-223ENST00000620632 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
TARDBP-223ENST00000620632 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
TARDBP-223ENST00000620632 NACADO15069 1562 aa21.87■■□□□ 1.09
TARDBP-223ENST00000620632 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
TARDBP-223ENST00000620632 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
TARDBP-223ENST00000620632 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
TARDBP-223ENST00000620632 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
TARDBP-223ENST00000620632 SCRIBQ14160 1630 aa21.32■■□□□ 1
TARDBP-223ENST00000620632 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
TARDBP-223ENST00000620632 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
TARDBP-223ENST00000620632 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
TARDBP-223ENST00000620632 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
TARDBP-223ENST00000620632 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
TARDBP-223ENST00000620632 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
TARDBP-223ENST00000620632 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
TARDBP-223ENST00000620632 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
TARDBP-223ENST00000620632 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
TARDBP-223ENST00000620632 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
TARDBP-223ENST00000620632 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
TARDBP-223ENST00000620632 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
TARDBP-223ENST00000620632 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
TARDBP-223ENST00000620632 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
TARDBP-223ENST00000620632 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
TARDBP-223ENST00000620632 WIZO95785 1651 aa20.1■□□□□ 0.81
TARDBP-223ENST00000620632 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
TARDBP-223ENST00000620632 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
TARDBP-223ENST00000620632 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
TARDBP-223ENST00000620632 NESP48681 1621 aa19.73■□□□□ 0.75
TARDBP-223ENST00000620632 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
TARDBP-223ENST00000620632 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
TARDBP-223ENST00000620632 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
TARDBP-223ENST00000620632 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
TARDBP-223ENST00000620632 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
TARDBP-223ENST00000620632 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
TARDBP-223ENST00000620632 CFTRP13569 1480 aa19.51■□□□□ 0.71
TARDBP-223ENST00000620632 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
TARDBP-223ENST00000620632 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
TARDBP-223ENST00000620632 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
TARDBP-223ENST00000620632 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
TARDBP-223ENST00000620632 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
TARDBP-223ENST00000620632 CUX2O14529 1486 aa19.29■□□□□ 0.68
TARDBP-223ENST00000620632 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
TARDBP-223ENST00000620632 WDR62O43379 1518 aa19.26■□□□□ 0.67
TARDBP-223ENST00000620632 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
TARDBP-223ENST00000620632 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
TARDBP-223ENST00000620632 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.65
TARDBP-223ENST00000620632 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
TARDBP-223ENST00000620632 CUX1P39880 1505 aa19.02■□□□□ 0.64
TARDBP-223ENST00000620632 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
TARDBP-223ENST00000620632 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
TARDBP-223ENST00000620632 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
TARDBP-223ENST00000620632 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
TARDBP-223ENST00000620632 SYNJ1O43426 1573 aa18.9■□□□□ 0.62
TARDBP-223ENST00000620632 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.62
TARDBP-223ENST00000620632 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
TARDBP-223ENST00000620632 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
TARDBP-223ENST00000620632 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
TARDBP-223ENST00000620632 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
TARDBP-223ENST00000620632 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
TARDBP-223ENST00000620632 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.6
TARDBP-223ENST00000620632 SOGA1O94964 1423 aa18.82■□□□□ 0.6
TARDBP-223ENST00000620632 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.595e-11■■□□□ 14.4
TARDBP-223ENST00000620632 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
TARDBP-223ENST00000620632 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
TARDBP-223ENST00000620632 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
TARDBP-223ENST00000620632 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
TARDBP-223ENST00000620632 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
TARDBP-223ENST00000620632 CHD1O14646 1710 aa18.61■□□□□ 0.57
TARDBP-223ENST00000620632 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
TARDBP-223ENST00000620632 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
TARDBP-223ENST00000620632 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
TARDBP-223ENST00000620632 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
TARDBP-223ENST00000620632 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
TARDBP-223ENST00000620632 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
TARDBP-223ENST00000620632 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
TARDBP-223ENST00000620632 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
TARDBP-223ENST00000620632 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
TARDBP-223ENST00000620632 FBLN2P98095 1184 aa18.44■□□□□ 0.54
TARDBP-223ENST00000620632 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
TARDBP-223ENST00000620632 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
TARDBP-223ENST00000620632 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
TARDBP-223ENST00000620632 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-223ENST00000620632 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
TARDBP-223ENST00000620632 IGF1RP08069 1367 aa18.38■□□□□ 0.53
TARDBP-223ENST00000620632 CUL7Q14999 1698 aa18.36■□□□□ 0.53
TARDBP-223ENST00000620632 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
TARDBP-223ENST00000620632 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
TARDBP-223ENST00000620632 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
TARDBP-223ENST00000620632 NUP160Q12769 1436 aa18.3■□□□□ 0.52
TARDBP-223ENST00000620632 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
TARDBP-223ENST00000620632 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
TARDBP-223ENST00000620632 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
TARDBP-223ENST00000620632 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
TARDBP-223ENST00000620632 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
TARDBP-223ENST00000620632 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
TARDBP-223ENST00000620632 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
TARDBP-223ENST00000620632 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms