RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.13not detected■■■■■ 57.3
MALAT1-213ENST00000618227 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.18not detected■■■■■ 41.9
MALAT1-213ENST00000618227 TIA1P31483 386 aaKnown RBP eCLIP14.95□□□□□ -0.02not detected■■■■■ 26.8
MALAT1-213ENST00000618227 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.48not detected■■■■□ 24.4
MALAT1-213ENST00000618227 TIAL1Q01085 375 aaKnown RBP eCLIP15.5■□□□□ 0.07not detected■■■■□ 23.1
MALAT1-213ENST00000618227 U2AF1Q01081 240 aaKnown RBP eCLIP21.07■□□□□ 0.96not detected■■□□□ 13.3
MALAT1-213ENST00000618227 HNRNPA1P09651 372 aaKnown RBP eCLIP16.75■□□□□ 0.27not detected■■□□□ 13.1
MALAT1-213ENST00000618227 KHSRPQ92945 711 aaKnown RBP eCLIP16.56■□□□□ 0.24not detected■□□□□ 11.3
MALAT1-213ENST00000618227 QKIQ96PU8 341 aaKnown RBP eCLIP16.11■□□□□ 0.17not detected■□□□□ 11.2
MALAT1-213ENST00000618227 SRSF1Q07955 248 aaKnown RBP eCLIP13.92□□□□□ -0.18not detected■□□□□ 11
MALAT1-213ENST00000618227 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2not detected■□□□□ 10.8
MALAT1-213ENST00000618227 SRSF7Q16629 238 aaKnown RBP eCLIP13.04□□□□□ -0.32not detected■□□□□ 9.8
MALAT1-213ENST00000618227 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.93□□□□□ -0.18not detected■□□□□ 9.4
Retrieved 13 of 13 RNA–protein pairs in 12.7 ms