RNA: ENST00000617128.1

SNORD3B-1-202, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

Gene SNORD3B-1, Length 218 nt, Biotype snoRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-202ENST00000617128 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.31e-323■■■■■ 2362.2
SNORD3B-1-202ENST00000617128 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.51□□□□□ -0.734e-95■■■■■ 329.3
SNORD3B-1-202ENST00000617128 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.28□□□□□ -0.62e-62■■■■■ 400.9
SNORD3B-1-202ENST00000617128 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.18□□□□□ -0.624e-58■■■■■ 510.1
SNORD3B-1-202ENST00000617128 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.432e-54■■■■■ 248.2
SNORD3B-1-202ENST00000617128 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.559e-54■■■■■ 339.3
SNORD3B-1-202ENST00000617128 DKC1O60832 514 aaKnown RBP eCLIP12.45□□□□□ -0.422e-52■■■■■ 77.2
SNORD3B-1-202ENST00000617128 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.462e-51■■■■■ 154.9
SNORD3B-1-202ENST00000617128 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.07□□□□□ -0.648e-43■■■■■ 229.3
SNORD3B-1-202ENST00000617128 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.411e-37■■■■■ 140.6
SNORD3B-1-202ENST00000617128 DDX21Q9NR30 783 aaKnown RBP eCLIP14.08□□□□□ -0.161e-36■■■■■ 138.5
SNORD3B-1-202ENST00000617128 RPS11P62280 158 aaKnown RBP eCLIP9.47□□□□□ -0.891e-35■■■■■ 95
SNORD3B-1-202ENST00000617128 DDX6P26196 483 aaKnown RBP eCLIP11.56□□□□□ -0.561e-34■■■■■ 202.4
SNORD3B-1-202ENST00000617128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.99□□□□□ -0.332e-34■■■■■ 157.7
SNORD3B-1-202ENST00000617128 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.053e-34■■■■■ 689.1
SNORD3B-1-202ENST00000617128 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.813e-34■■■■■ 160.9
SNORD3B-1-202ENST00000617128 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.4□□□□□ -0.267e-34■■■■■ 184.2
SNORD3B-1-202ENST00000617128 RPS3P23396 243 aaKnown RBP eCLIP10.93□□□□□ -0.668e-32■■■■■ 34.9
SNORD3B-1-202ENST00000617128 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.381e-29■■■■■ 41.3
SNORD3B-1-202ENST00000617128 NCBP2P52298 156 aaKnown RBP eCLIP10.37□□□□□ -0.756e-29■■■■■ 103.3
SNORD3B-1-202ENST00000617128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.332e-28■■■■■ 27.5
SNORD3B-1-202ENST00000617128 EIF3HO15372 352 aaKnown RBP eCLIP11.15□□□□□ -0.623e-27■■■■■ 123
SNORD3B-1-202ENST00000617128 PUS1Q9Y606 427 aaKnown RBP eCLIP8.51□□□□□ -1.051e-26■■■■■ 120
SNORD3B-1-202ENST00000617128 TROVE2P10155 538 aaKnown RBP eCLIP10.65□□□□□ -0.72e-26■■■■■ 143.5
SNORD3B-1-202ENST00000617128 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.543e-25■■■■■ 327.1
SNORD3B-1-202ENST00000617128 SMNDC1O75940 238 aaKnown RBP eCLIP9.76□□□□□ -0.855e-24■■■■■ 82
SNORD3B-1-202ENST00000617128 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.351e-23■■■■■ 65
SNORD3B-1-202ENST00000617128 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.511e-23■■■■■ 47.8
SNORD3B-1-202ENST00000617128 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.263e-22■■■■■ 129.2
SNORD3B-1-202ENST00000617128 TRA2AQ13595 282 aaKnown RBP eCLIP10.62□□□□□ -0.712e-21■■■■■ 72.8
SNORD3B-1-202ENST00000617128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.494e-20■■■■■ 931.7
SNORD3B-1-202ENST00000617128 RBM22Q9NW64 420 aaKnown RBP eCLIP11.24□□□□□ -0.619e-19■■■■■ 91.8
SNORD3B-1-202ENST00000617128 NOLC1Q14978 699 aaKnown RBP eCLIP12.06□□□□□ -0.483e-18■■■■■ 51.9
SNORD3B-1-202ENST00000617128 ZRANB2O95218 330 aaKnown RBP eCLIP11.46□□□□□ -0.571e-16■■■■■ 74.9
SNORD3B-1-202ENST00000617128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.93□□□□□ -0.51e-16■■■■■ 58.7
SNORD3B-1-202ENST00000617128 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.11□□□□□ -0.631e-15■■■■■ 220.2
SNORD3B-1-202ENST00000617128 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.743e-15■■■■■ 484.2
SNORD3B-1-202ENST00000617128 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.353e-15■■■■■ 90.5
SNORD3B-1-202ENST00000617128 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.63e-15■■■■■ 59.2
SNORD3B-1-202ENST00000617128 POLR2GP62487 172 aaKnown RBP eCLIP8.72□□□□□ -1.013e-13■■■■■ 60.1
SNORD3B-1-202ENST00000617128 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.743e-13■■■■■ 47
SNORD3B-1-202ENST00000617128 EIF3GO75821 320 aaKnown RBP eCLIP8.28□□□□□ -1.084e-13■■■■■ 60.4
SNORD3B-1-202ENST00000617128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.535e-13■■■■■ 484.6
SNORD3B-1-202ENST00000617128 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.567e-13■■■■■ 47.3
SNORD3B-1-202ENST00000617128 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.061e-12■■■■■ 42.5
SNORD3B-1-202ENST00000617128 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.442e-12■■■■■ 172.7
SNORD3B-1-202ENST00000617128 RBFOX2O43251 390 aaKnown RBP eCLIP8.96□□□□□ -0.982e-12■■■■■ 43.7
SNORD3B-1-202ENST00000617128 GRSF1Q12849 480 aaKnown RBP eCLIP11.25□□□□□ -0.613e-12■■■■■ 43.8
SNORD3B-1-202ENST00000617128 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.574e-12■■■■■ 60.5
SNORD3B-1-202ENST00000617128 NSUN2Q08J23 767 aaKnown RBP eCLIP11.24□□□□□ -0.617e-12■□□□□ 9.7
SNORD3B-1-202ENST00000617128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.88e-12■■■■■ 60
SNORD3B-1-202ENST00000617128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.52□□□□□ -0.572e-11■■■■■ 59.2
SNORD3B-1-202ENST00000617128 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.422e-11■■■■□ 24.4
SNORD3B-1-202ENST00000617128 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.44□□□□□ -0.583e-11■■■■■ 35.5
SNORD3B-1-202ENST00000617128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.11□□□□□ -0.632e-10■■■■■ 39.1
SNORD3B-1-202ENST00000617128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.392e-10■■■■■ 59.1
SNORD3B-1-202ENST00000617128 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.196e-10■■□□□ 14.2
SNORD3B-1-202ENST00000617128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.26□□□□□ -0.937e-10■■■□□ 17.6
SNORD3B-1-202ENST00000617128 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.631e-9■□□□□ 8.7
SNORD3B-1-202ENST00000617128 RBM15Q96T37 977 aaKnown RBP eCLIP11.16□□□□□ -0.624e-9■■■□□ 16.5
SNORD3B-1-202ENST00000617128 HNRNPKP61978 463 aaKnown RBP eCLIP10.86□□□□□ -0.672e-8■■■■■ 28.8
SNORD3B-1-202ENST00000617128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.57□□□□□ -0.562e-8■■■■■ 85.7
SNORD3B-1-202ENST00000617128 RBM5P52756 815 aaKnown RBP eCLIP13.23□□□□□ -0.292e-8■■■■■ 30
SNORD3B-1-202ENST00000617128 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.923e-8■■□□□ 12.2
SNORD3B-1-202ENST00000617128 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.446e-8■■■■□ 24
SNORD3B-1-202ENST00000617128 ZC3H11AO75152 810 aaKnown RBP eCLIP11.93□□□□□ -0.59e-8■■■■■ 32.1
SNORD3B-1-202ENST00000617128 EIF3DO15371 548 aaKnown RBP eCLIP12.18□□□□□ -0.461e-7■■■■■ 32
SNORD3B-1-202ENST00000617128 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.241e-7■■■■■ 32.4
SNORD3B-1-202ENST00000617128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.531e-7■■■■■ 37.6
SNORD3B-1-202ENST00000617128 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■□□ 16.3
SNORD3B-1-202ENST00000617128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.572e-7■■■■□ 26
SNORD3B-1-202ENST00000617128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■■■■ 33.3
SNORD3B-1-202ENST00000617128 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■■■■□ 25.4
SNORD3B-1-202ENST00000617128 SRSF7Q16629 238 aaKnown RBP eCLIP9.2□□□□□ -0.942e-7■■□□□ 12.8
SNORD3B-1-202ENST00000617128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.945e-7■■■■■ 29.4
SNORD3B-1-202ENST00000617128 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■■■■■ 29.6
SNORD3B-1-202ENST00000617128 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.82□□□□□ -0.843e-6■■■■■ 68
SNORD3B-1-202ENST00000617128 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■■■■□ 22.3
SNORD3B-1-202ENST00000617128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.13□□□□□ -0.794e-6■■■■□ 20.4
SNORD3B-1-202ENST00000617128 HLTFQ14527 1009 aaKnown RBP eCLIP11.18□□□□□ -0.626e-6■■■■□ 22
SNORD3B-1-202ENST00000617128 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.55□□□□□ -0.728e-6■■■■■ 36.8
Retrieved 81 of 81 RNA–protein pairs in 53.3 ms