RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 FMR1Q06787 632 aaKnown RBP eCLIP8.81□□□□□ -11e-323■■■■■ 34.3
MALAT1-208ENST00000616527 TARDBPQ13148 414 aaKnown RBP eCLIP7.28□□□□□ -1.241e-323■■■■■ 31
MALAT1-208ENST00000616527 TIA1P31483 386 aaKnown RBP eCLIP7.55□□□□□ -1.21e-19■■■■□ 21.7
MALAT1-208ENST00000616527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.09□□□□□ -1.431e-323■■■□□ 17.4
MALAT1-208ENST00000616527 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.191e-323■■■□□ 16.2
MALAT1-208ENST00000616527 CSTF2P33240 577 aaKnown RBP eCLIP7.23□□□□□ -1.253e-79■■■□□ 16
MALAT1-208ENST00000616527 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.83□□□□□ -1.162e-35■■□□□ 13.9
MALAT1-208ENST00000616527 PCBP2Q15366 365 aaKnown RBP eCLIP7.76□□□□□ -1.171e-323■■□□□ 13.2
MALAT1-208ENST00000616527 SLBPQ14493 270 aaKnown RBP eCLIP7.54□□□□□ -1.21e-25■■□□□ 13.1
MALAT1-208ENST00000616527 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.22□□□□□ -1.251e-323■■□□□ 12.6
MALAT1-208ENST00000616527 U2AF1Q01081 240 aaKnown RBP eCLIP10.25□□□□□ -0.771e-323■■□□□ 11.8
MALAT1-208ENST00000616527 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.015e-52■□□□□ 11
MALAT1-208ENST00000616527 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.376e-43■□□□□ 10.9
MALAT1-208ENST00000616527 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.551e-323■□□□□ 10.9
MALAT1-208ENST00000616527 HNRNPA1P09651 372 aaKnown RBP eCLIP7.88□□□□□ -1.153e-13■□□□□ 10.4
MALAT1-208ENST00000616527 SRSF7Q16629 238 aaKnown RBP eCLIP6.77□□□□□ -1.333e-54■□□□□ 10.3
MALAT1-208ENST00000616527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.891e-323■□□□□ 10
MALAT1-208ENST00000616527 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.71□□□□□ -1.181e-323■□□□□ 9.7
MALAT1-208ENST00000616527 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.751e-323■□□□□ 9.6
MALAT1-208ENST00000616527 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.951e-323■□□□□ 9.1
MALAT1-208ENST00000616527 DDX42Q86XP3 938 aaKnown RBP eCLIP8.22□□□□□ -1.091e-323■□□□□ 8.9
MALAT1-208ENST00000616527 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.531e-323■□□□□ 8.9
MALAT1-208ENST00000616527 TIAL1Q01085 375 aaKnown RBP eCLIP7.82□□□□□ -1.161e-323■□□□□ 8.8
MALAT1-208ENST00000616527 SRSF1Q07955 248 aaKnown RBP eCLIP6.19□□□□□ -1.422e-77■□□□□ 8.6
MALAT1-208ENST00000616527 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.711e-323■□□□□ 8.4
MALAT1-208ENST00000616527 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.612e-39■□□□□ 8.4
MALAT1-208ENST00000616527 SAFBQ15424 915 aaKnown RBP eCLIP9.07□□□□□ -0.961e-323■□□□□ 8.2
Retrieved 27 of 27 RNA–protein pairs in 18.4 ms