RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.175e-8■■■■■ 197.4
FOXN3-219ENST00000615335 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■■ 137.9
FOXN3-219ENST00000615335 SF3B4Q15427 424 aaKnown RBP eCLIP13.08□□□□□ -0.328e-18■■■■■ 59.1
FOXN3-219ENST00000615335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.39e-10■■■■■ 56.1
FOXN3-219ENST00000615335 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.163e-10■■■■■ 54.2
FOXN3-219ENST00000615335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■■■ 48.3
FOXN3-219ENST00000615335 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.031e-11■■■■■ 45.9
FOXN3-219ENST00000615335 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■■ 39.6
FOXN3-219ENST00000615335 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.677e-7■■■■■ 38.5
FOXN3-219ENST00000615335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■■■■■ 36.2
FOXN3-219ENST00000615335 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■■■ 35.4
FOXN3-219ENST00000615335 BCCIPQ9P287 314 aaKnown RBP eCLIP15.35■□□□□ 0.058e-8■■■■■ 34.1
FOXN3-219ENST00000615335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■■ 33.1
FOXN3-219ENST00000615335 PCBP2Q15366 365 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■■■■■ 27.9
FOXN3-219ENST00000615335 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.823e-8■■■■□ 26.7
FOXN3-219ENST00000615335 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 25.9
FOXN3-219ENST00000615335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.94□□□□□ -0.185e-6■■■■□ 25.3
FOXN3-219ENST00000615335 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■■□ 21.2
FOXN3-219ENST00000615335 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.454e-7■■■■□ 20.3
FOXN3-219ENST00000615335 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.627e-7■■■■□ 20.3
FOXN3-219ENST00000615335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■■□ 20.3
FOXN3-219ENST00000615335 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 20.1
FOXN3-219ENST00000615335 CSTF2P33240 577 aaKnown RBP eCLIP12.56□□□□□ -0.44e-7■■■■□ 19.8
FOXN3-219ENST00000615335 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■■■□ 19.5
FOXN3-219ENST00000615335 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■■□ 19.3
FOXN3-219ENST00000615335 HNRNPKP61978 463 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■□□ 18.9
FOXN3-219ENST00000615335 NKRFO15226 690 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■□□ 18.4
FOXN3-219ENST00000615335 MATR3P43243 847 aaKnown RBP eCLIP14□□□□□ -0.179e-7■■■□□ 17.4
FOXN3-219ENST00000615335 TIAL1Q01085 375 aaKnown RBP eCLIP12.64□□□□□ -0.398e-7■■■□□ 17
FOXN3-219ENST00000615335 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.894e-7■■■□□ 16.7
FOXN3-219ENST00000615335 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.27e-8■■■□□ 16.4
FOXN3-219ENST00000615335 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■□□ 16.2
FOXN3-219ENST00000615335 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.55e-7■■■□□ 16.1
FOXN3-219ENST00000615335 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■■■□□ 15.8
FOXN3-219ENST00000615335 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.39e-7■■■□□ 15.7
FOXN3-219ENST00000615335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.25□□□□□ -0.453e-7■■■□□ 15.4
FOXN3-219ENST00000615335 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■□□ 15.1
FOXN3-219ENST00000615335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.331e-7■■■□□ 14.8
FOXN3-219ENST00000615335 QKIQ96PU8 341 aaKnown RBP eCLIP13.08□□□□□ -0.326e-7■■□□□ 14.2
FOXN3-219ENST00000615335 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■□□□ 14.2
FOXN3-219ENST00000615335 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■□□□ 13.3
FOXN3-219ENST00000615335 ILF3Q12906 894 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■□□□ 13
FOXN3-219ENST00000615335 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■□□□ 12.8
FOXN3-219ENST00000615335 HNRNPLP14866 589 aaKnown RBP eCLIP12.78□□□□□ -0.362e-8■■□□□ 12.4
FOXN3-219ENST00000615335 HLTFQ14527 1009 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■■□□□ 12.3
FOXN3-219ENST00000615335 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.144e-6■■□□□ 12.2
FOXN3-219ENST00000615335 TAF15Q92804 592 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■□□□ 11.9
FOXN3-219ENST00000615335 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■□□□ 11.4
FOXN3-219ENST00000615335 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.993e-8■□□□□ 10.9
FOXN3-219ENST00000615335 SFPQP23246 707 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■□□□□ 10.4
FOXN3-219ENST00000615335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■□□□□ 10.4
FOXN3-219ENST00000615335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.9□□□□□ -0.187e-7■□□□□ 10.3
FOXN3-219ENST00000615335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■□□□□ 10.2
FOXN3-219ENST00000615335 PPIGQ13427 754 aaKnown RBP eCLIP13.5□□□□□ -0.256e-8■□□□□ 10.1
FOXN3-219ENST00000615335 CDC40O60508 579 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■□□□□ 9.5
FOXN3-219ENST00000615335 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■□□□□ 8.2
Retrieved 56 of 56 RNA–protein pairs in 30 ms