RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 SF3B1O75533 1304 aaKnown RBP eCLIP15.72■□□□□ 0.119e-7■■■■■ 57.4
IRF3-224ENST00000599680 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.243e-14■■■■■ 55.3
IRF3-224ENST00000599680 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.442e-8■■■■■ 53.6
IRF3-224ENST00000599680 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■■■■ 47.1
IRF3-224ENST00000599680 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.312e-15■■■■■ 42.7
IRF3-224ENST00000599680 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.661e-7■■■■■ 40.2
IRF3-224ENST00000599680 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.223e-9■■■■■ 34.5
IRF3-224ENST00000599680 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.782e-7■■■■■ 34.3
IRF3-224ENST00000599680 U2AF2P26368 475 aaKnown RBP eCLIP15.95■□□□□ 0.141e-7■■■■■ 32.6
IRF3-224ENST00000599680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■■■■■ 32
IRF3-224ENST00000599680 RPS3P23396 243 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■■□ 25.3
IRF3-224ENST00000599680 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.399e-7■■■■□ 24.7
IRF3-224ENST00000599680 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■■■■□ 22.3
IRF3-224ENST00000599680 PRPF4O43172 522 aaKnown RBP eCLIP13.69□□□□□ -0.221e-5■■■■□ 19.3
IRF3-224ENST00000599680 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■■□□ 17.9
IRF3-224ENST00000599680 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.362e-8■■■□□ 17.9
IRF3-224ENST00000599680 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.374e-7■■■□□ 16.7
IRF3-224ENST00000599680 DKC1O60832 514 aaKnown RBP eCLIP16.11■□□□□ 0.179e-9■■■□□ 15.7
IRF3-224ENST00000599680 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■■□□□ 14
IRF3-224ENST00000599680 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■□□□ 13.6
IRF3-224ENST00000599680 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.326e-7■■□□□ 12.6
IRF3-224ENST00000599680 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■■□□□ 12.3
Retrieved 22 of 22 RNA–protein pairs in 22.4 ms