RNA: ENST00000599256.5

UBA52-212, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 2

Gene UBA52, Length 927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-212ENST00000599256 SF3B1O75533 1304 aaKnown RBP eCLIP25.75■■□□□ 1.718e-6■■■■■ 47.2
UBA52-212ENST00000599256 EFTUD2Q15029 972 aaKnown RBP eCLIP22.13■■□□□ 1.135e-7■■■■■ 41.7
UBA52-212ENST00000599256 AQRO60306 1485 aaKnown RBP eCLIP41.64■■■■■ 4.262e-10■■■■■ 30.6
UBA52-212ENST00000599256 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.02■□□□□ 0.89e-10■■■■■ 29.2
UBA52-212ENST00000599256 GTF2F1P35269 517 aaKnown RBP eCLIP26.02■■□□□ 1.766e-8■■■■■ 28.8
UBA52-212ENST00000599256 HNRNPMP52272 730 aaKnown RBP eCLIP37.18■■■■□ 3.547e-7■■■■□ 23.6
UBA52-212ENST00000599256 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.92■■■□□ 2.065e-6■■■■□ 22.3
UBA52-212ENST00000599256 RPS3P23396 243 aaKnown RBP eCLIP22.76■■□□□ 1.233e-18■■■■□ 20.2
UBA52-212ENST00000599256 DDX3XO00571 662 aaKnown RBP eCLIP23.96■■□□□ 1.435e-9■■■□□ 17.4
UBA52-212ENST00000599256 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.61■■□□□ 1.217e-6■■■□□ 16.9
UBA52-212ENST00000599256 PABPC4Q13310 644 aaKnown RBP eCLIP28.37■■■□□ 2.139e-36■■■□□ 16.3
UBA52-212ENST00000599256 SF3A3Q12874 501 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■■□□□ 13.6
UBA52-212ENST00000599256 LARP4Q71RC2 724 aaKnown RBP eCLIP21.45■■□□□ 1.022e-8■■□□□ 13.1
UBA52-212ENST00000599256 RBM15Q96T37 977 aaKnown RBP eCLIP23.48■■□□□ 1.351e-10■■□□□ 12.6
UBA52-212ENST00000599256 EIF3GO75821 320 aaKnown RBP eCLIP16.57■□□□□ 0.246e-11■■□□□ 12.2
UBA52-212ENST00000599256 METAP2P50579 478 aaKnown RBP eCLIP26.98■■□□□ 1.912e-10■■□□□ 11.8
UBA52-212ENST00000599256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.75■■□□□ 1.714e-14■■□□□ 11.7
UBA52-212ENST00000599256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.99■■■■□ 3.352e-16■■□□□ 11.6
UBA52-212ENST00000599256 ZRANB2O95218 330 aaKnown RBP eCLIP23.43■■□□□ 1.341e-7■□□□□ 11.2
UBA52-212ENST00000599256 YBX3P16989 372 aaKnown RBP eCLIP31.08■■■□□ 2.578e-54■□□□□ 10.9
UBA52-212ENST00000599256 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.88■■□□□ 1.097e-16■□□□□ 10.4
UBA52-212ENST00000599256 SND1Q7KZF4 910 aaKnown RBP eCLIP24.27■■□□□ 1.489e-9■□□□□ 10.3
UBA52-212ENST00000599256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.07■■■■□ 3.687e-20■□□□□ 9.9
UBA52-212ENST00000599256 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.81■■□□□ 1.088e-6■□□□□ 9.8
UBA52-212ENST00000599256 PRPF4O43172 522 aaKnown RBP eCLIP22.4■■□□□ 1.182e-12■□□□□ 9.7
UBA52-212ENST00000599256 SUB1P53999 127 aaKnown RBP eCLIP17.63■□□□□ 0.415e-16■□□□□ 9
UBA52-212ENST00000599256 FTOQ9C0B1 505 aaKnown RBP eCLIP26.84■■□□□ 1.895e-6■□□□□ 8.1
UBA52-212ENST00000599256 PCBP1Q15365 356 aaKnown RBP eCLIP26.14■■□□□ 1.785e-9■□□□□ 8
UBA52-212ENST00000599256 WRNQ14191 1432 aaPredicted RBP eCLIP41.33■■■■■ 4.212e-16■□□□□ 8
Retrieved 29 of 29 RNA–protein pairs in 21.3 ms