RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.032e-17■■■■■ 149.1
ARHGEF1-214ENST00000596957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.173e-6■■■■■ 133.4
ARHGEF1-214ENST00000596957 SF3B1O75533 1304 aaKnown RBP eCLIP16.11■□□□□ 0.172e-10■■■■■ 68.9
ARHGEF1-214ENST00000596957 DDX3XO00571 662 aaKnown RBP eCLIP15.72■□□□□ 0.112e-11■■■■■ 44.1
ARHGEF1-214ENST00000596957 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■■■■■ 43.5
ARHGEF1-214ENST00000596957 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.611e-7■■■■■ 31.6
ARHGEF1-214ENST00000596957 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■■■■■ 26.9
ARHGEF1-214ENST00000596957 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.52e-10■■■■□ 20.1
ARHGEF1-214ENST00000596957 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.283e-6■■■■□ 20
ARHGEF1-214ENST00000596957 EFTUD2Q15029 972 aaKnown RBP eCLIP14.72□□□□□ -0.057e-7■■■□□ 17.8
ARHGEF1-214ENST00000596957 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.225e-12■■■□□ 17
ARHGEF1-214ENST00000596957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.463e-7■■■□□ 15
ARHGEF1-214ENST00000596957 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.14■□□□□ 0.492e-7■■■□□ 15
ARHGEF1-214ENST00000596957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.148e-7■■■□□ 15
ARHGEF1-214ENST00000596957 RBM22Q9NW64 420 aaKnown RBP eCLIP15.21■□□□□ 0.036e-9■■□□□ 13.7
ARHGEF1-214ENST00000596957 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.83□□□□□ -0.25e-7■■□□□ 13.6
ARHGEF1-214ENST00000596957 SF3A3Q12874 501 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■□□□ 13.4
ARHGEF1-214ENST00000596957 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.599e-6■■□□□ 12.8
ARHGEF1-214ENST00000596957 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.96■□□□□ 0.315e-6■■□□□ 11.9
ARHGEF1-214ENST00000596957 PPIGQ13427 754 aaKnown RBP eCLIP16.48■□□□□ 0.232e-9■□□□□ 10.8
ARHGEF1-214ENST00000596957 FMR1Q06787 632 aaKnown RBP eCLIP17.83■□□□□ 0.443e-7■□□□□ 10.6
ARHGEF1-214ENST00000596957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.446e-7■□□□□ 9.1
Retrieved 22 of 22 RNA–protein pairs in 14.5 ms