RNA: ENST00000593153.5
ABCA5-213, Transcript of ATP binding cassette subfamily A member 5, human
Retrieved 9 of 9 RNA–protein pairs in 8.8 ms
ABCA5-213, Transcript of ATP binding cassette subfamily A member 5, human
TSL 2
Gene ABCA5, Length 3,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA5-213 | ENST00000593153 | PRPF4 | O43172 | 522 aa | Known RBP eCLIP | 11.71 | □□□□□ -0.53 | 6e-9 | ■□□□□ 10.3 |
ABCA5-213 | ENST00000593153 | U2AF2 | P26368 | 475 aa | Known RBP eCLIP | 13.54 | □□□□□ -0.24 | 2e-8 | ■■■□□ 14.7 |
ABCA5-213 | ENST00000593153 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 10.07 | □□□□□ -0.8 | 3e-8 | ■■■■□ 24 |
ABCA5-213 | ENST00000593153 | HLTF | Q14527 | 1009 aa | Known RBP eCLIP | 12.36 | □□□□□ -0.43 | 2e-7 | ■□□□□ 9.2 |
ABCA5-213 | ENST00000593153 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 15.02 | □□□□□ -0.01 | 7e-7 | ■■■■□ 20.9 |
ABCA5-213 | ENST00000593153 | HNRNPC | P07910 | 306 aa | Known RBP eCLIP | 11.01 | □□□□□ -0.65 | 9e-7 | ■■□□□ 12.3 |
ABCA5-213 | ENST00000593153 | CSTF2T | Q9H0L4 | 616 aa | Known RBP eCLIP | 10.76 | □□□□□ -0.69 | 2e-6 | ■■■■□ 21.9 |
ABCA5-213 | ENST00000593153 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 18.86 | ■□□□□ 0.61 | 4e-6 | ■■■■□ 24.8 |
ABCA5-213 | ENST00000593153 | XRN2 | Q9H0D6 | 950 aa | Known RBP eCLIP | 12.8 | □□□□□ -0.36 | 5e-6 | ■□□□□ 8.4 |