RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 GRSF1Q12849 480 aaKnown RBP eCLIP18.93■□□□□ 0.623e-15■■■□□ 15.6
MBD3-207ENST00000590550 SF3B1O75533 1304 aaKnown RBP eCLIP19.45■□□□□ 0.74e-15■■■■■ 120.3
MBD3-207ENST00000590550 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.81■□□□□ 0.63e-14■■■□□ 15.8
MBD3-207ENST00000590550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.65■□□□□ 0.92e-11■■□□□ 11.7
MBD3-207ENST00000590550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.44■□□□□ 0.868e-11■■■■□ 21.9
MBD3-207ENST00000590550 NKRFO15226 690 aaKnown RBP eCLIP21.47■■□□□ 1.033e-10■□□□□ 8.7
MBD3-207ENST00000590550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.68□□□□□ -0.063e-9■■■□□ 16
MBD3-207ENST00000590550 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.533e-9■■□□□ 12.7
MBD3-207ENST00000590550 UPF1Q92900 1129 aaKnown RBP eCLIP18.91■□□□□ 0.624e-9■■■■■ 52.2
MBD3-207ENST00000590550 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.5■□□□□ 0.556e-9■■■□□ 15.4
MBD3-207ENST00000590550 PRPF4O43172 522 aaKnown RBP eCLIP20.02■□□□□ 0.81e-8■■■■□ 25.6
MBD3-207ENST00000590550 NONOQ15233 471 aaKnown RBP eCLIP21.36■■□□□ 1.012e-8■■■■■ 41.8
MBD3-207ENST00000590550 AKAP1Q92667 903 aaKnown RBP eCLIP18.14■□□□□ 0.494e-8■■■■■ 28.8
MBD3-207ENST00000590550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.27■□□□□ 0.518e-8■■■■□ 26
MBD3-207ENST00000590550 RBM22Q9NW64 420 aaKnown RBP eCLIP19.3■□□□□ 0.681e-7■■■■■ 30.3
MBD3-207ENST00000590550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.742e-7■□□□□ 9.9
MBD3-207ENST00000590550 EWSR1Q01844 656 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■□□□□ 11.1
MBD3-207ENST00000590550 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.963e-7■■■■□ 20
MBD3-207ENST00000590550 GTF2F1P35269 517 aaKnown RBP eCLIP22.87■■□□□ 1.253e-7■■□□□ 13.8
MBD3-207ENST00000590550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.953e-7■□□□□ 9.3
MBD3-207ENST00000590550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.94■□□□□ 0.784e-7■■□□□ 13.8
MBD3-207ENST00000590550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.74e-7■■■□□ 17
MBD3-207ENST00000590550 PCBP2Q15366 365 aaKnown RBP eCLIP18.73■□□□□ 0.595e-7■■□□□ 12.9
MBD3-207ENST00000590550 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.977e-7■■■□□ 18.2
MBD3-207ENST00000590550 ZC3H11AO75152 810 aaKnown RBP eCLIP20.24■□□□□ 0.839e-7■□□□□ 9.3
MBD3-207ENST00000590550 DDX3XO00571 662 aaKnown RBP eCLIP20.84■□□□□ 0.931e-6■■□□□ 12.2
MBD3-207ENST00000590550 RBM15Q96T37 977 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■■■■□ 23.5
MBD3-207ENST00000590550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■■■■ 123.6
MBD3-207ENST00000590550 EFTUD2Q15029 972 aaKnown RBP eCLIP20.14■□□□□ 0.812e-6■■■■■ 28.8
MBD3-207ENST00000590550 METAP2P50579 478 aaKnown RBP eCLIP22.16■■□□□ 1.142e-6■■■□□ 17.6
MBD3-207ENST00000590550 FKBP4Q02790 459 aaKnown RBP eCLIP22.5■■□□□ 1.192e-6■■□□□ 13.2
MBD3-207ENST00000590550 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■□□□□ 10.6
MBD3-207ENST00000590550 DDX6P26196 483 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■■■■□ 25.3
MBD3-207ENST00000590550 PUM1Q14671 1186 aaKnown RBP eCLIP18.21■□□□□ 0.512e-6■■■□□ 16.4
MBD3-207ENST00000590550 PABPN1Q86U42 306 aaKnown RBP eCLIP29.92■■■□□ 2.383e-6■■■□□ 17.7
MBD3-207ENST00000590550 PCBP1Q15365 356 aaKnown RBP eCLIP19.34■□□□□ 0.693e-6■■■■□ 23.3
MBD3-207ENST00000590550 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.18■■□□□ 1.143e-6■■■■■ 28.4
MBD3-207ENST00000590550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.97■■□□□ 1.114e-6■■□□□ 12.6
MBD3-207ENST00000590550 RBFOX2O43251 390 aaKnown RBP eCLIP15.93■□□□□ 0.144e-6■□□□□ 9
MBD3-207ENST00000590550 SF3B4Q15427 424 aaKnown RBP eCLIP19.16■□□□□ 0.665e-6■■□□□ 12.2
MBD3-207ENST00000590550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.95e-6■■■□□ 17.2
MBD3-207ENST00000590550 WRNQ14191 1432 aaPredicted RBP eCLIP29.34■■■□□ 2.295e-6■■■■■ 46
MBD3-207ENST00000590550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■■□□□ 11.4
MBD3-207ENST00000590550 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.77■□□□□ 0.929e-6■■■■■ 27.7
Retrieved 44 of 44 RNA–protein pairs in 23.3 ms