RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.41□□□□□ -0.428e-48■■■■□ 23.3
TPM4-210ENST00000588507 TIA1P31483 386 aaKnown RBP eCLIP5.89□□□□□ -1.471e-15■■□□□ 12.5
TPM4-210ENST00000588507 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.53□□□□□ -1.526e-14■□□□□ 10.6
TPM4-210ENST00000588507 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.21□□□□□ -0.942e-12■■□□□ 12.2
TPM4-210ENST00000588507 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.373e-12■■■■□ 25.2
TPM4-210ENST00000588507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.29□□□□□ -1.247e-12■■■■■ 49
TPM4-210ENST00000588507 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.92□□□□□ -1.142e-11■□□□□ 8.1
TPM4-210ENST00000588507 PRPF4O43172 522 aaKnown RBP eCLIP6.38□□□□□ -1.392e-10■■□□□ 13.2
TPM4-210ENST00000588507 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.953e-9■■■□□ 15.5
TPM4-210ENST00000588507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.77□□□□□ -1.333e-9■■■□□ 17.9
TPM4-210ENST00000588507 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.382e-8■■■■□ 22.2
TPM4-210ENST00000588507 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.062e-8■■■■■ 32.1
TPM4-210ENST00000588507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.813e-8■■□□□ 13.7
TPM4-210ENST00000588507 U2AF2P26368 475 aaKnown RBP eCLIP7.77□□□□□ -1.173e-8■□□□□ 9.8
TPM4-210ENST00000588507 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.063e-8■■■□□ 18
TPM4-210ENST00000588507 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.62□□□□□ -1.036e-8■□□□□ 9.1
TPM4-210ENST00000588507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.24□□□□□ -1.097e-8■■■■□ 22.9
TPM4-210ENST00000588507 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.46□□□□□ -1.381e-7■■■■■ 26.8
TPM4-210ENST00000588507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.24□□□□□ -1.412e-7■■□□□ 14.5
TPM4-210ENST00000588507 FXR2P51116 673 aaKnown RBP eCLIP7.54□□□□□ -1.22e-7■□□□□ 10.7
TPM4-210ENST00000588507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.053e-7■□□□□ 8.7
TPM4-210ENST00000588507 EFTUD2Q15029 972 aaKnown RBP eCLIP5.94□□□□□ -1.464e-7■■■■□ 25
TPM4-210ENST00000588507 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.744e-7■■□□□ 12.4
TPM4-210ENST00000588507 ZNF622Q969S3 477 aaKnown RBP eCLIP10.21□□□□□ -0.774e-7■■□□□ 11.9
TPM4-210ENST00000588507 G3BP1Q13283 466 aaKnown RBP eCLIP8.07□□□□□ -1.125e-7■□□□□ 11.1
TPM4-210ENST00000588507 SF3B1O75533 1304 aaKnown RBP eCLIP7.8□□□□□ -1.166e-7■■■■■ 83
TPM4-210ENST00000588507 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.02□□□□□ -1.296e-7■■■□□ 19.1
TPM4-210ENST00000588507 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.117e-7■■■■□ 20.3
TPM4-210ENST00000588507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.59e-7■■□□□ 13.8
TPM4-210ENST00000588507 EWSR1Q01844 656 aaKnown RBP eCLIP5.34□□□□□ -1.551e-6■■■□□ 16.2
TPM4-210ENST00000588507 DDX6P26196 483 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■□□□□ 10.8
TPM4-210ENST00000588507 SF3A3Q12874 501 aaKnown RBP eCLIP4.52□□□□□ -1.691e-6■■■■■ 41.8
TPM4-210ENST00000588507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.62□□□□□ -1.511e-6■■■□□ 14.8
TPM4-210ENST00000588507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■□□□ 14.3
TPM4-210ENST00000588507 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.131e-6■■□□□ 12.4
TPM4-210ENST00000588507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■□□□ 13.1
TPM4-210ENST00000588507 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■□□□□ 11.1
TPM4-210ENST00000588507 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.14□□□□□ -1.271e-6■■■□□ 19.1
TPM4-210ENST00000588507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.84□□□□□ -1.631e-6■■■■■ 56.2
TPM4-210ENST00000588507 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■□ 21.5
TPM4-210ENST00000588507 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■■■ 29.8
TPM4-210ENST00000588507 LSM11P83369 360 aaKnown RBP eCLIP6.44□□□□□ -1.382e-6■□□□□ 9.8
TPM4-210ENST00000588507 PUM1Q14671 1186 aaKnown RBP eCLIP9.14□□□□□ -0.952e-6■■□□□ 13.8
TPM4-210ENST00000588507 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■□□□□ 8.5
TPM4-210ENST00000588507 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.2□□□□□ -0.782e-6■■■■■ 40.6
TPM4-210ENST00000588507 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.243e-6■■■■■ 34.2
TPM4-210ENST00000588507 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■■■■ 31.9
TPM4-210ENST00000588507 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.176e-6■■■□□ 16.7
TPM4-210ENST00000588507 RBM5P52756 815 aaKnown RBP eCLIP9.23□□□□□ -0.938e-6■■■■□ 20.7
TPM4-210ENST00000588507 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.239e-6■□□□□ 9.6
Retrieved 50 of 50 RNA–protein pairs in 36 ms