RNA: ENST00000586995.5
ABCA5-204, Transcript of ATP binding cassette subfamily A member 5, human
Retrieved 5 of 5 RNA–protein pairs in 6.3 ms
ABCA5-204, Transcript of ATP binding cassette subfamily A member 5, human
TSL 1 (best)
Gene ABCA5, Length 4,062 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA5-204 | ENST00000586995 | SF3A3 | Q12874 | 501 aa | Known RBP eCLIP | 1.88 | □□□□□ -2.11 | 5e-6 | ■■■■■ 35.2 |
ABCA5-204 | ENST00000586995 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 1.67 | □□□□□ -2.14 | 5e-8 | ■■■■■ 27 |
ABCA5-204 | ENST00000586995 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 0.95 | □□□□□ -2.26 | 5e-6 | ■■■■□ 25.9 |
ABCA5-204 | ENST00000586995 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 2.98 | □□□□□ -1.93 | 9e-7 | ■■■□□ 18.6 |
ABCA5-204 | ENST00000586995 | HLTF | Q14527 | 1009 aa | Known RBP eCLIP | 2.18 | □□□□□ -2.06 | 2e-7 | ■□□□□ 9.2 |